Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g00764 ATGGTGTCAGGTTCAGGGATCTGCGCAAATAGGGTGGTCATTGATGCGTACCACCACATGCTTGGTCGTCTCGCTTCCATTGTAGCAAAGGAGCTTCTCAACGGACAGAAAGTGGTGTTGGTTCGTTGCGAGGAGATTTGCATCTCTGGTGGACTCGTAAGGCAAGTACATGAGATTCCTTCACAAGCGCATGGTCCTATCCACTTCCGTGCTCCTGCCAAGATCTTCTGGCGCACTATTCATGGAATAATACCACATAAGACAAAGGGTGGGGAAGCTGCACTTGCTCGTTTGAAGGTGTGGGAAGCCAACCTGGACGGTGACAGTGGTAAAGGAACCGGCTTGCTTACTGAGGTAAGTACATGTGCTAATTTTCTTCCTTTTATTAGCATTTGA 396 0.4848 MVSGSGICANRVVIDAYHHMLGRLASIVAKELLNGQKVVLVRCEEICISGGLVRQVHEIPSQAHGPIHFRAPAKIFWRTIHGIIPHKTKGGEAALARLKVWEANLDGDSGKGTGLLTEVSTCANFLPFISI. 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g00764 131 PANTHER RIBOSOMAL PROTEIN L13 1 102 IPR005822 GO:0003735|GO:0005840|GO:0006412
Seca6g00764 131 SUPERFAMILY Ribosomal protein L13 11 102 IPR036899 GO:0003735|GO:0005840|GO:0006412
Seca6g00764 131 CDD Ribosomal_L13 12 102 IPR005822 GO:0003735|GO:0005840|GO:0006412
Seca6g00764 131 Gene3D Ribosomal protein L13 7 114 IPR036899 GO:0003735|GO:0005840|GO:0006412
Seca6g00764 131 Pfam Ribosomal protein L13 11 102 IPR005822 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g00764 Seca-Chr6 25532594 25532989 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g00764 1 102 Cytoplasmic Ribosomal Protein Gene Family AT5G48760 72.072 9.37e-53 163
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g00764 K02872 - gmx:100499978 166.007