Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g00757 ATGACAGTTGAGAGAAGATTTGTTTTGGTTGGGATTAGAATTGATAGCCATAGTAGACAACTCCTCAACTGGGCTCTTGTCAAAGTTGCTGAACCTGGGGATTGTGTTATTGCAGTCCATGTAGTTAAAAACTCAGTTTATGTTTCCAAAAACAAGAGCCTGATAGATGAGTATTTAGAGGTCTATGAAGGCCTGTGTGGTGTGAAGAAGGTTGATCTCACTGGTCAAATCTTAACAGGAAACTCCATTAGAAGCATTCTTGTTAGAGAAGCAAAATCCCATGCTGCTCTGGCTCTAGTGGTAGGGGGTCGAGCTACCATAGCTAAATATTGTGCCAAACGACTACCACCCACCACCAATGTTCTAGCCATCAAAGATTCAAGAGTTGTCTTCAGGAGGTGCACCAATAAACAACCACCAGGTAGTCTTATAGTGGATCCAAGACCAAGTTTAACAAGCATAGAGAGCCTGAGTGAGAGAGTAACCCAGTCTGAATTTGGTGACTCTGTCTCTATGGTGGAGAGTGAGAAACCAACACCTCAAAATACCATAGATCAATTGAAGGAAGAATCATTTGATAGATTAGGAAGAAGCAAGTCAAGGTCAATATCTATGTTTGCTGGTGATCCTACTGAGCAGAAACTTGGGTGGCCTCTACTCCGCAGAGCCAATTCAGGAATCTCACATACTCGGCATACAAGGGACATGTCAGTAGTACAATGGGTGATGACCTTACCAGATCGCTCACCACGTAAAAGTCCTCAACCTTCTTCCATTGAGGAAAATCCATTCCAAAGGAGCATCAGTGACATTGAGGATGAGAGCTCAGAAAATTCTTCACCTACATCTGTTGAACTACCAAAAGGCCTAGAAGGGATGTTAAACATAGATTCACTCAGTTGCAAGTGGTTCAGCCTTGAGGTTCTAAAGTCTTACACAAACCAATTCTCTTCAGAAAACTTGATTGGGAAAGGAGGGAGCAATCGTGTGTACAAAGGAGTTCTCCCTGACGGAAAGCTAATTGCTGTTAAAGTATTGAAGTCATCAAAAGAAGCATTGAAAGATTTTGCCCTTGAGGTGGAAATAGTATCCTCATTGAAGCATAAAAACGTGGCCCCTCTACTTGGGATTTGCATAGAGGACAATACTTTAATCTCTGTTTATGATTATTTCCCCAAAGGCAGCTTAGAGGAAAATCTACATGGAAAGAACAAGGATGGATCCATCTTGTCATGGGAAGTGAGATTCAATGTAGCTGTTGGGATTGCTGAAGCCCTGGATTACCTACACAGGGAAGCTTTGAAGCCTGTTATACATAGAGATGTCAAGTCTTCAAACATTCTTCTTTCCCATGGATATGAACCACAATTGTCTGATTTTGGCCTTGCAATATGGGGACCAACAACTTCATCCTTTTTGACACAAGAAGATGTAGTGGGAACATTTGGTTATCTTGCTCCTGAATACTTCATGTATGGAAAGGTCAGTGACAAGATAGATGTCTATGCCTTTGGTGTAGTGCTTCTTGAACTAATATCAGGGAGGGAACCAATCAGTTCTGAACCTTGCAAAGGACAAGAAAGCTTGGTCGTGTGGGTAAGAGCTAACCCCTTTTTGACTATAGAATATAAATCTTTTTTTTTAGTATAA 1650 0.4139 MTVERRFVLVGIRIDSHSRQLLNWALVKVAEPGDCVIAVHVVKNSVYVSKNKSLIDEYLEVYEGLCGVKKVDLTGQILTGNSIRSILVREAKSHAALALVVGGRATIAKYCAKRLPPTTNVLAIKDSRVVFRRCTNKQPPGSLIVDPRPSLTSIESLSERVTQSEFGDSVSMVESEKPTPQNTIDQLKEESFDRLGRSKSRSISMFAGDPTEQKLGWPLLRRANSGISHTRHTRDMSVVQWVMTLPDRSPRKSPQPSSIEENPFQRSISDIEDESSENSSPTSVELPKGLEGMLNIDSLSCKWFSLEVLKSYTNQFSSENLIGKGGSNRVYKGVLPDGKLIAVKVLKSSKEALKDFALEVEIVSSLKHKNVAPLLGICIEDNTLISVYDYFPKGSLEENLHGKNKDGSILSWEVRFNVAVGIAEALDYLHREALKPVIHRDVKSSNILLSHGYEPQLSDFGLAIWGPTTSSFLTQEDVVGTFGYLAPEYFMYGKVSDKIDVYAFGVVLLELISGREPISSEPCKGQESLVVWVRANPFLTIEYKSFFLV. 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g00757 549 SUPERFAMILY Protein kinase-like (PK-like) 298 537 IPR011009 -
Seca6g00757 549 Gene3D Transferase(Phosphotransferase) domain 1 391 541 - -
Seca6g00757 549 MobiDBLite consensus disorder prediction 250 265 - -
Seca6g00757 549 SMART serkin_6 316 547 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca6g00757 549 ProSiteProfiles Protein kinase domain profile. 316 549 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca6g00757 549 FunFam probable receptor-like serine/threonine-protein kinase At5g57670 285 390 - -
Seca6g00757 549 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 8 104 - -
Seca6g00757 549 MobiDBLite consensus disorder prediction 246 287 - -
Seca6g00757 549 PANTHER OS08G0249100 PROTEIN 176 534 IPR046958 -
Seca6g00757 549 ProSitePatterns Serine/Threonine protein kinases active-site signature. 437 449 IPR008271 GO:0004672|GO:0006468
Seca6g00757 549 CDD USP_Like 8 104 - -
Seca6g00757 549 Gene3D Phosphorylase Kinase; domain 1 288 390 - -
Seca6g00757 549 Pfam Protein kinase domain 317 521 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g00757 Seca-Chr6 25208494 25213218 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g00757 298 540 Receptor kinase-like Gene Family AT5G56890 47.012 1.41e-63 223
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Seca6g00757 Pkinase 6.4e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g00757 - - lja:Lj0g3v0266219.1 820.846