Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g00740 ATGGCGTTGCCGGTGGTGGTGGACGCTGAGTACCTCAAGGAAGTCGACAAGGCTCGCCGCGATCTCCGCGCTCTAATCGCCAACAGAAATTGCGCTCCTCTCATGCTTCGTTTGGCCTGGCACGATGCCGGCACATACGATGCCAAGACAAAGACCGGTGGACCTAATGGTTCCATCAGGAACGAGGAAGAGTATTCTCACGGCGCCAACAATGGATTGAAGAAGGCTCTTGATTTCTGTGAGGAAGTGAAGGCAAAACATCCTAAGATTACATATGCAGACCTTTACCAGCTTGCAGGTGTTGTTGCAGTTGAGGTTACTGGGGGTCCCACAATTGACTTTGTTCCTGGAAGAAGGGATTCAAAAATATCTCCCAAAGAAGGGCGGCTTCCTGATGCTAAACAAGGTGTGCCTCATCTCCGTGATATCTTTTATCGAATGGGCTTGACTGACAAGGATATTGTTGCACTGTCTGGGGGACATACGCTGATATTCTTACCTTGTTTTCTGTGTTGTTACAAGGGAAGAGCACATCCAGAGAGATCAGGGTTTGATGGCCCTTGGACAGCCGATCCTCTGAAGTTTGATAACTCATACTTTGTGGAACTTTTAAAAGAAGAATCTGCTGGGCTGCTAAAACTTCCAACAGACAACGCTTTATTGGACGATATTGAATTTCGCCGTTATGTTGAGCTGTATGCGAAGGATGAGGATGCATTTTTTCGAGATTATGCTGAATCGCATAAGAAACTTTCAGAGCTTGGCTTTGTGCCAAGTTCAAAGGCGACTTCTCCTAAGGATGGGACCATACTGGCACAAGGTGCTGTTGGAGTTGTAGTTACTGCTGCAGTGGTGATCCTTAGTTACTTGTATGAAGTTCGCAAAAGAGCAAAGTAG 897 0.4682 MALPVVVDAEYLKEVDKARRDLRALIANRNCAPLMLRLAWHDAGTYDAKTKTGGPNGSIRNEEEYSHGANNGLKKALDFCEEVKAKHPKITYADLYQLAGVVAVEVTGGPTIDFVPGRRDSKISPKEGRLPDAKQGVPHLRDIFYRMGLTDKDIVALSGGHTLIFLPCFLCCYKGRAHPERSGFDGPWTADPLKFDNSYFVELLKEESAGLLKLPTDNALLDDIEFRRYVELYAKDEDAFFRDYAESHKKLSELGFVPSSKATSPKDGTILAQGAVGVVVTAAVVILSYLYEVRKRAK. 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g00740 298 Pfam Peroxidase 19 236 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca6g00740 298 FunFam Cytosolic ascorbate peroxidase 18 135 - -
Seca6g00740 298 CDD ascorbate_peroxidase 4 256 - -
Seca6g00740 298 ProSitePatterns Peroxidases active site signature. 32 43 IPR019794 GO:0004601
Seca6g00740 298 PRINTS Haem peroxidase superfamily signature 32 46 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca6g00740 298 PRINTS Haem peroxidase superfamily signature 108 120 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca6g00740 298 PRINTS Haem peroxidase superfamily signature 90 107 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca6g00740 298 PRINTS Haem peroxidase superfamily signature 153 168 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca6g00740 298 PRINTS Haem peroxidase superfamily signature 188 203 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca6g00740 298 ProSitePatterns Peroxidases proximal heme-ligand signature. 153 163 IPR019793 -
Seca6g00740 298 Gene3D - 18 255 - -
Seca6g00740 298 PRINTS Plant ascorbate peroxidase signature 11 31 IPR002207 GO:0004601|GO:0006979|GO:0020037
Seca6g00740 298 PRINTS Plant ascorbate peroxidase signature 50 60 IPR002207 GO:0004601|GO:0006979|GO:0020037
Seca6g00740 298 PRINTS Plant ascorbate peroxidase signature 32 47 IPR002207 GO:0004601|GO:0006979|GO:0020037
Seca6g00740 298 PRINTS Plant ascorbate peroxidase signature 108 120 IPR002207 GO:0004601|GO:0006979|GO:0020037
Seca6g00740 298 PRINTS Plant ascorbate peroxidase signature 217 241 IPR002207 GO:0004601|GO:0006979|GO:0020037
Seca6g00740 298 PRINTS Plant ascorbate peroxidase signature 64 88 IPR002207 GO:0004601|GO:0006979|GO:0020037
Seca6g00740 298 PRINTS Plant ascorbate peroxidase signature 129 146 IPR002207 GO:0004601|GO:0006979|GO:0020037
Seca6g00740 298 PRINTS Plant ascorbate peroxidase signature 89 107 IPR002207 GO:0004601|GO:0006979|GO:0020037
Seca6g00740 298 PRINTS Plant ascorbate peroxidase signature 147 168 IPR002207 GO:0004601|GO:0006979|GO:0020037
Seca6g00740 298 Gene3D Peroxidase, domain 2 131 248 - -
Seca6g00740 298 PANTHER THYLAKOID LUMENAL 29 KDA PROTEIN, CHLOROPLASTIC-RELATED 7 263 IPR044831 GO:0004601|GO:0034599
Seca6g00740 298 ProSiteProfiles Plant heme peroxidase family profile. 32 298 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca6g00740 298 SUPERFAMILY Heme-dependent peroxidases 19 260 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g00740 Seca-Chr6 24655530 24661779 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g00740 90 255 Peroxidase AT4G17690 34.896 8.40e-21 89.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g00740 K00434 - gmx:100170727 521.546