Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g00725 ATGGGAAAACTTGTTTTCTTCTTCTTGTTCTTCTTTCTACTTTCTCAAAACTATTGTGTTTTTTCTGCTGATAATGAAGCTTCTTCCAAGACCTTCATCTTTCGCGTTGATTCTGAATCAAAGCCTTCTATTTTCCCCACTCATTACCACTGGTACACCTCTGAGTTCACCGAACAGACCCACATCCTCCACGTGTACGACACCGTTTTCCATGGCTTCTCTGCGGTCCTCACGCGCCAACAAGTTGCTTCCATAAGCCAACACCCTTCCATCCTCGCCGTCTTCGAGGATCGCCGCCGGCAACTCCACACCACTCGCTCCCCACAGTTCCTCGGCCTCCGCAACCAGCAAGGTCTCTGGTCAGAATCCGACTACGGCTCCGACGTCATCATCGGAGTCTTCGACACCGGCGTTTGGCCTGAGCGCCGGAGCTTCTCCGATTTAAACCTTGGCCCCATTCCTCGCCGATGGAAAGGGGTTTGTGAAACCGGTGTCAGATTCTCACCCAAAAACTGCAACAGAAAACTCATCGGTGCTAGATTCTTCTCCAAAGGTCACGAAGCAGGTGCTAGTTCAGCTGGTCCTTTGAATCCCATCAACGAAACCGTCGAATTCCGATCCCCTCGTGACGCCGACGGCCATGGAACCCACACGGCGTCCACCGCCGCCGGTCGATACTCTTTCCAAGCCAACATGTCTGGTTACGCTTCAGGGATCGCAAAAGGTGTGGCTCCGAAAGCTCGATTGGCTGTGTACAAGGTTTGCTGGAAGGATTCCGGTTGCTTCGACTCCGATATCCTCGCCGCCTTCGACGCCGCCGTGAACGACGGCGTTGATGTCATCTCCATATCCATCGGCGGCGGAGACGGTATCGCTTCCCCTTACTATCTCGACCCCATTGCAATCGGCTCATACGGCGCCGTTTCGAGAGGAGTCTTCGTCTCTTCATCCGCCGGAAACGACGGACCAAGCGGAATGTCAGTGACGAACCTCGCTCCATGGTTGACCACCGTGGGAGCAGGAACCATCGATCGGGATTTCCCTTCCACCGTGATCCTCGGCGACGGGAGAAGACTCTCCGGCGTGTCGCTCTACGCCGGAGCAGCTTTGAAGGGGAAAATGTATCCCTTAATCTACCCAGGAAAATCAGGGGTTCTTGGTGATTCACTCTGCATGGAAAATTCCCTGGATCCAAACATGGTAAGAGGGAAAATCGTGGTGTGTGACAGAGGAAGCAGCCCTAGAGTAGCGAAAGGGTTGGTGGTGAAGAAAGCAGGTGGTGTAGGAATGATTCTCGCGAACGGAATCTCAAACGGCGAAGGACTCGTCGGAGATGCTCATCTTCTTCCTGCATGTGCTGTTGGCGCTAACGAAGGTGATGCAATCAAATCCTACATCTCTTCCTCTTCAAACCCTACAGCCACACTCGATTTCAAAGGCACTGTTCTCGGAATCAAACCGGCACCGGTTCTTGCTTCTTTCTCCGCTAGAGGACCGAACGGTTTGAACCCTCAGATTCTCAAACCGGATTTAATAGCTCCCGGTGTTAACATTCTCGCGGCTTGGACCGATGCTGTGGGTCCCACCGGTTTGGACTCTGATTCTCGAAGAACAGAGTTCAACATATTGTCTGGTACTTCAATGGCTTGCCCTCACGTGAGTGGTGCCGCGGCGTTGTTGAAATCTGCGCATCCTGATTGGAGCCCCGCCGCTATAAGATCCGCTATGATGACAACCGCTTCTGTTTTAGATAACAAGAATGGACCCATGATTGATGAAGCCACTGGGAATGTTTCCACGCCTTATGATTTCGGTGCGGGTCATCTTAATTTGGGTCAAGCTATGGATCCTGGTTTGGTTTATGATATCACTAATAATGATTATGTTAACTTCTTGTGTGGAATTGGCTACGGGCCTAGGGTTATTCAAGTGATTACTCGTGTGCCGGCGAGTTGTCCGGCGAGGAGGCCGGCGCCGGAGAATCTGAATTACCCGTCGTTTGTGGCTATGTTCCCGGTGTCGTCCAAGGGGATGGCGTCGAAGATGTTTATAAGGACGGTGACGAATGTTGGGGCGGCGAACTCGGTTTATAGGGTGAGGGTGGAGTCGCAGGTGAAAGGAGTGACGGTGACGGTGAGGCCAGGGAGGCTTGTGTTCTCGGAGGCGGTGAAGAAACGGAGCTTTGTGGTGACGGTGACGGCGGATGTACGGAACGTGAAGATGGGTCCTTCTGGAGCGGTGTTCGGGTCACTTTCGTGGACGGATGGTAAGCATGTGATTCGGAGCCCCATTGTGGTGACTCAAATAGAACCGTTATAG 2319 0.5265 MGKLVFFFLFFFLLSQNYCVFSADNEASSKTFIFRVDSESKPSIFPTHYHWYTSEFTEQTHILHVYDTVFHGFSAVLTRQQVASISQHPSILAVFEDRRRQLHTTRSPQFLGLRNQQGLWSESDYGSDVIIGVFDTGVWPERRSFSDLNLGPIPRRWKGVCETGVRFSPKNCNRKLIGARFFSKGHEAGASSAGPLNPINETVEFRSPRDADGHGTHTASTAAGRYSFQANMSGYASGIAKGVAPKARLAVYKVCWKDSGCFDSDILAAFDAAVNDGVDVISISIGGGDGIASPYYLDPIAIGSYGAVSRGVFVSSSAGNDGPSGMSVTNLAPWLTTVGAGTIDRDFPSTVILGDGRRLSGVSLYAGAALKGKMYPLIYPGKSGVLGDSLCMENSLDPNMVRGKIVVCDRGSSPRVAKGLVVKKAGGVGMILANGISNGEGLVGDAHLLPACAVGANEGDAIKSYISSSSNPTATLDFKGTVLGIKPAPVLASFSARGPNGLNPQILKPDLIAPGVNILAAWTDAVGPTGLDSDSRRTEFNILSGTSMACPHVSGAAALLKSAHPDWSPAAIRSAMMTTASVLDNKNGPMIDEATGNVSTPYDFGAGHLNLGQAMDPGLVYDITNNDYVNFLCGIGYGPRVIQVITRVPASCPARRPAPENLNYPSFVAMFPVSSKGMASKMFIRTVTNVGAANSVYRVRVESQVKGVTVTVRPGRLVFSEAVKKRSFVVTVTADVRNVKMGPSGAVFGSLSWTDGKHVIRSPIVVTQIEPL. 773
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g00725 772 FunFam Subtilisin-like protease SBT1.5 632 769 - -
Seca6g00725 772 PRINTS Subtilisin serine protease family (S8) signature 544 560 IPR015500 -
Seca6g00725 772 PRINTS Subtilisin serine protease family (S8) signature 210 223 IPR015500 -
Seca6g00725 772 PRINTS Subtilisin serine protease family (S8) signature 126 145 IPR015500 -
Seca6g00725 772 Gene3D - 632 769 - -
Seca6g00725 772 Pfam PA domain 376 462 IPR003137 -
Seca6g00725 772 CDD PA_subtilisin_like 350 476 - -
Seca6g00725 772 SUPERFAMILY Subtilisin-like 102 619 IPR036852 GO:0004252|GO:0006508
Seca6g00725 772 Gene3D Peptidase S8/S53 domain 128 628 IPR036852 GO:0004252|GO:0006508
Seca6g00725 772 CDD Peptidases_S8_3 101 581 IPR034197 -
Seca6g00725 772 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 58 766 IPR045051 -
Seca6g00725 772 FunFam Subtilisin-like protease SBT1.5 128 357 - -
Seca6g00725 772 ProSitePatterns Serine proteases, subtilase family, serine active site. 545 555 IPR023828 -
Seca6g00725 772 Gene3D - 344 483 - -
Seca6g00725 772 FunFam subtilisin-like protease SBT1.5 344 483 - -
Seca6g00725 772 Pfam Fibronectin type-III domain 661 766 IPR041469 -
Seca6g00725 772 Pfam Peptidase inhibitor I9 45 103 IPR010259 -
Seca6g00725 772 ProSiteProfiles Serine proteases, subtilase domain profile. 101 615 - -
Seca6g00725 772 SUPERFAMILY PA domain 400 469 IPR046450 -
Seca6g00725 772 Pfam Subtilase family 126 597 IPR000209 GO:0006508|GO:0008236
Seca6g00725 772 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 16 103 IPR037045 -
Seca6g00725 772 MobiDBLite consensus disorder prediction 187 218 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g00725 Seca-Chr6 24374440 24376758 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g00725 8 772 Subtilisin-like Serine Gene Family AT4G34980 74.055 0.0 1197
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g00725 - - gmx:100817537 1370.53