Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g00714 ATGAAGAGGTTGGGTATTGGAGAAGGGGAGTGGAGTTCATGGAATTGGAGGTCGGAAGGGGATATGATGGTCAATGGAGCTTTCTTTATGGCTTCGGGTGAAGATGGTGAGGGAAAGTATGAGAAGGCTTACAGTGTTGACTTTAAATCTGTTGATCGGATTTCATTCCTCACCGTAGCCGTCGGTGTTCTCGGTGTTGCGAGTACTCATCTTCTCCACCAAAGCCAAAGGCTGCCGCTCTTCAAGTAA 249 0.4779 MKRLGIGEGEWSSWNWRSEGDMMVNGAFFMASGEDGEGKYEKAYSVDFKSVDRISFLTVAVGVLGVASTHLLHQSQRLPLFK. 83
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g00714 82 PRINTS Pollen allergen Amb family signature 43 66 IPR018082 -
Seca6g00714 82 PRINTS Pollen allergen Amb family signature 14 38 IPR018082 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g00714 Seca-Chr6 24021920 24022168 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g00714 2 67 Polysaccharide Lyase AT3G53190 59.091 2.61e-21 84.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g00714 K01728 - gmx:100815062 95.9005