Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g00713 ATGAATACAGAGTCTTCTAACTTGACAATTGGGGAGTTGAATAAGATGGCAAAAGAACATGAAAAAAATCCAAAGAAAATACCAAATGTTGAAGTGAACAAATATTTTTCAAATGATCTACAGTGTGAACACAGGGATAGTACCGTGCCCTATTTTGCGCTTGGATTATGTGAAGCATGCTACAAGGATTTTGATAAACTCTCTGGTGGACTTGGTGGTGGTTCAGATCCTCCAGCATTCCAGCATGCTGAGAGGGAGAGAATGGCAAAATCACACTCTGACTTGGTGAATGTGTCAAATGGTGCATGTGAGAGACAAATAGAAGAGCATGCCTCTGGGCCTGAAAGTATTGGGGCTAATGTGCATATGGCCACTCACGATGAATCAGAAAGTTTCTCTGATGTTGATGATCAGGAGGTTGATGGTTATCTTTATGATGAGGAGGGAAAGAATCGCAAGAAGATCAAATGGGAAAATATGTATCAAGATTATTATCTTGAGAAACAAGAAGCTGCCAAGAAGCAGCTACGGAAAAACCCAGAAAGAGACGAGCTCAAGAGGCAGAAAACTCTGGTCCTGCTCAATCAGCTGAAGAGGCCACTAGTCAAATGTTGA 615 0.413 MNTESSNLTIGELNKMAKEHEKNPKKIPNVEVNKYFSNDLQCEHRDSTVPYFALGLCEACYKDFDKLSGGLGGGSDPPAFQHAERERMAKSHSDLVNVSNGACERQIEEHASGPESIGANVHMATHDESESFSDVDDQEVDGYLYDEEGKNRKKIKWENMYQDYYLEKQEAAKKQLRKNPERDELKRQKTLVLLNQLKRPLVKC. 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g00713 204 Pfam Brf1-like TBP-binding domain 133 184 IPR011665 -
Seca6g00713 204 Gene3D Single helix bin 116 179 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g00713 Seca-Chr6 23892532 23901502 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g00713 2 169 Inorganic Solute Cotransporters AT2G01280 37.017 8.00e-17 76.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g00713 K15196 - ccaj:109793056 170.629