Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g00712 ATGGTTTATTGTGATCACTGTTGGAAAAACGTTTCAGGGTTGCGAGTCGATGATGGTCCCTTATGTTGCAGCGAATGTGGGAAGGTGTTGGAAGACTACCATTTTTCTCAGGAGCCCACCTTTGTGAAAAATGCGGCAGGGCAGAGCAAATTATCAGGTCATTATATAAGAACAATTCAAAGTGAATTCTCTGCATCACGTCAAAGGACTTTAGATAAAGCTTATGAAGATATTAAATATTTAAGTTTCAACCTTGGAGTGAACGATGAAACTATGGCCAACCAAGCTTTGGCCTTTTATAGAATAGCTCTTGAGCAAAATTTCACCAAGGGACGTAAATCAGAACTAGTACAGGCTGCTTGTCTCTATATTGCATTTTGGGCAAATAAGAAGCCATACCATCTTATTGAATTTTCAAATTATTTAAGGACAAATGTTTATATGCTAGGTAAAGTTTTTTCACAGCTCTGTGAAGTATTAAGGCTTGAAGAGCACCCAATTATTCAAAAACCTGTTGATCCAACTCGTTTTGTTTATAGAGATGTGAATACTACGGATTGCCCATGTATGTGA 573 0.3752 MVYCDHCWKNVSGLRVDDGPLCCSECGKVLEDYHFSQEPTFVKNAAGQSKLSGHYIRTIQSEFSASRQRTLDKAYEDIKYLSFNLGVNDETMANQALAFYRIALEQNFTKGRKSELVQAACLYIAFWANKKPYHLIEFSNYLRTNVYMLGKVFSQLCEVLRLEEHPIIQKPVDPTRFVYRDVNTTDCPCM. 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g00712 190 Gene3D - 64 165 - -
Seca6g00712 190 PANTHER TRANSCRIPTION INITIATION FACTOR IIB-RELATED 2 180 IPR000812 GO:0006352|GO:0070897
Seca6g00712 190 SUPERFAMILY Zinc beta-ribbon 2 43 - -
Seca6g00712 190 Pfam Transcription factor TFIIB repeat 68 157 IPR013150 GO:0017025
Seca6g00712 190 SUPERFAMILY Cyclin-like 75 163 IPR036915 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g00712 Seca-Chr6 23882248 23892500 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g00712 1 184 Inorganic Solute Cotransporters AT2G01280 41.398 2.12e-36 130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g00712 K15196 - gmx:100789154 285.419