LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Seca6g00706	ATGGGAACCTCCGATTTCTCTATTTCCACCACCACCAAATGGCTAGGATTTGTCACCGCCGTGTGGATCCAATGTATCTCCGGCAACAACTACACTTTCTCCAATTACTCTCATGCTCTAAAAACCCTTATGCACCTCACTCAGGTGGAGCTCAACAATCTCTCCGTCGCTAAAGATGTCGGCAAGGCCTTTGGCCTTCTCGCCGGCCTTGCCTCCGATCGATTCCCCACTTGGGCCATTCTCCTCATTGGCTCCATTGAAGGCCTCATCGGCTACGGTGCTCAATGGCTCGTCGTTGGCCAAATAATTCCACCTCTTCCATATTGGCAGATGTGTGTATTTCTATGTTTGGGAGGCAATAGCACAACATGGATGAACACTGCAGTTTTAGTCACTTGCATACGCAACTTCAGAAGAAACAGAGGACCTGTTTCAGGGATTCTGAAAGGGTTTGTTGGATTGAGCACTGCTATCTTCACCAATCTTTGCTCTGCTCTCTTTGCTGATGATCCTGCTTCCTTTCTTCTCATGCTAGCTATAATCCCCTTCGTTGTTTGTCTCACCGGTGTGTTTTTCCTCCGTGAGGTTCCTCCGGCTAAATCAACCACTGCCGCCGAAGACAGTGAAGAGGCAAAGTACTTTGGCATATGCAACGCCATCGCTGTCGTCGTCGCGTTTTATCTCTTGGCTTATGGTTTCGTGCCAAACGCTAGCGGTTTGGTGTCGAAGGTGTTCGTCGCCGTTTTGGTTGTTCTATTGGTGTCGCCGTTGGGGATCCCGGTGTACTCTTACTTCAAAGGGAGGAATTCGACCCGGTTTAGACCGGGCGTTGACATTGAGGGGCAGCGGGTCAATGAACCGTTGCTTCGAAGCAATGAAAAGGAAAACGTAGCCGCGGTGGTGGCGGCGGAGGAAGAGGAAGCGGTGATTGAGAAGGTATGGCCGGCGATTGGGGAGGAGCACACGATATGGGAAGCGCTGAGGAGCTTGGATTTTTGGATCTTGTTCGTGTCGTTTCTGTGTGGGGTTGGAACGGGTTTGGCGGTGATGAACAATATGGGTCAAATCGGGTTGGCGCTCGGATACAGTGACGTGTCACTATTTGTGTCATTGACTAGCATTTTTGGCTTTTTCGGACGGATCGTTTCGGGTTCCATTTCGGAGCTTTTCATCAAGAAAGCTGCAACGCCTAGGCCTCTTTGGAATGCAGCATCTCAGATTCTGATGGCTGTGGGCTACATACTCTTGGCTATGGCTATGCCTGGTTCACTTTACATTGGCTCTATTGTAGTTGGCATATGCTATGGAGTTCGGCTTGCTGTTACAGTCCCAACAGCCTCTGAATTATTTGGACTAAAATATTATGGTCTCATCTACAACATTCTCATCCTCAACCTTCCCCTTGGTTCTTTCCTCTTTTCTGGGCTGCTTGCTGGCATTCTGTATGATATGGAGGCAACTACAACAGAAGGAGGAGGCAACACCTGTGTTGGAGGTCATTGTTACAGGCTAGTCTTTATTATCATGGCTGGAGCATGTATTGTTGGGTTCTTCTTAGACATTCTATTGTCAATCAGAACAAAGAATCTCTACAACAAGATTTCCGTGAGCAAGAAATCCAAGAAATCCTCAGGGACATCTAGTAGCTAA	1650	0.483	MGTSDFSISTTTKWLGFVTAVWIQCISGNNYTFSNYSHALKTLMHLTQVELNNLSVAKDVGKAFGLLAGLASDRFPTWAILLIGSIEGLIGYGAQWLVVGQIIPPLPYWQMCVFLCLGGNSTTWMNTAVLVTCIRNFRRNRGPVSGILKGFVGLSTAIFTNLCSALFADDPASFLLMLAIIPFVVCLTGVFFLREVPPAKSTTAAEDSEEAKYFGICNAIAVVVAFYLLAYGFVPNASGLVSKVFVAVLVVLLVSPLGIPVYSYFKGRNSTRFRPGVDIEGQRVNEPLLRSNEKENVAAVVAAEEEEAVIEKVWPAIGEEHTIWEALRSLDFWILFVSFLCGVGTGLAVMNNMGQIGLALGYSDVSLFVSLTSIFGFFGRIVSGSISELFIKKAATPRPLWNAASQILMAVGYILLAMAMPGSLYIGSIVVGICYGVRLAVTVPTASELFGLKYYGLIYNILILNLPLGSFLFSGLLAGILYDMEATTTEGGGNTCVGGHCYRLVFIIMAGACIVGFFLDILLSIRTKNLYNKISVSKKSKKSSGTSSS.	550

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Seca6g00706	549	CDD	MFS_Mch1p_like	13	516	-	-
	Seca6g00706	549	Gene3D	MFS general substrate transporter like domains	14	277	IPR036259	-
	Seca6g00706	549	PANTHER	UNCHARACTERIZED NODULIN-LIKE PROTEIN	14	532	-	-
	Seca6g00706	549	Pfam	Nodulin-like	13	261	IPR010658	-
	Seca6g00706	549	Gene3D	MFS general substrate transporter like domains	325	529	IPR036259	-
	Seca6g00706	549	SUPERFAMILY	MFS general substrate transporter	15	529	IPR036259	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Seca6g00706	Seca-Chr6	23702908	23707369	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Seca6g00706	13	545	Nodulin-like Gene Family	AT4G34950	69.065	0.0	771

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Seca6g00706	-		-	gmx:100800237	810.446