Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g00693 ATGGCTGCTGCTTCTCTCTATGAGGTGCTTGGAATTTCAATCGGAGCAAGCTGCCCTGAAATAAAGGCAGCTTACAGAAAGCTGGCAAGAACATGCCACCCTGATGTTGTGGCCATGAATCAGAAAGAAAGCTCAGCTAACCAGTTCAAGATGGTCCATTTAGCTTATTCAACATTGTCTGACCCAGATAAGCGTGCTCAATATGACAGAGAAATCTATGGACACAGAAGATCAGCAAATATAGTTTCCATGTCAAGAAGAAATCAGTCATTTTATTCTCATGCTGGAAGGAAATGGGAAACGGACCAATGTTGGTAG 318 0.4277 MAAASLYEVLGISIGASCPEIKAAYRKLARTCHPDVVAMNQKESSANQFKMVHLAYSTLSDPDKRAQYDREIYGHRRSANIVSMSRRNQSFYSHAGRKWETDQCW. 106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g00693 105 ProSiteProfiles dnaJ domain profile. 5 72 IPR001623 -
Seca6g00693 105 PANTHER DNAJ DOMAIN (PROKARYOTIC HEAT SHOCK PROTEIN)-RELATED 3 98 - -
Seca6g00693 105 ProSitePatterns Nt-dnaJ domain signature. 49 68 IPR018253 -
Seca6g00693 105 Gene3D DnaJ domain 1 95 IPR036869 -
Seca6g00693 105 PRINTS DnaJ domain signature 44 64 IPR001623 -
Seca6g00693 105 PRINTS DnaJ domain signature 7 25 IPR001623 -
Seca6g00693 105 PRINTS DnaJ domain signature 25 40 IPR001623 -
Seca6g00693 105 Pfam DnaJ domain 6 69 IPR001623 -
Seca6g00693 105 SMART dnaj_3 4 64 IPR001623 -
Seca6g00693 105 SUPERFAMILY Chaperone J-domain 3 75 IPR036869 -
Seca6g00693 105 CDD DnaJ 7 61 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g00693 Seca-Chr6 23239235 23239552 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g00693 7 69 C2H2 Transcription Factor Family AT1G74250 46.269 8.41e-11 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g00693 - - gmx:100305807 163.31