Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g00683 ATGGAAGAGGTTGTCGATGTGGACAGGGTTTGTGCTGAGGAAGAGGCGGTCGAGGTTCAACCGGTTGAAGAATCACCGGTTCAAGCGATTGTAGAGGTTGTCGATGTGGACAAGGTTTGTGTGAAGAAAGAAGCGGCTAGGGATGAAGTGGAGGTGGTGAAGAAGGAGGCGGTTGAAGAGAAGATCCCGAACCTTGAGGATGGTTGGGAGGATGCCGATGGAATGGGCAAAAACTGTCATTCCACTCATGCAATATGGAAAAGTTATGCTTTTACGTTCACCACTCTATATTCACAGAGTGTGTTGATACATCTTGAGCACAAAGAAGCTGAGGAAAAACTAGATAACTTTGTTCACAGGATTACAAGGTGGATTGATGAAGAGGAAGATAAAAGCAAAGCTACAGGGAAAACAAGTTTGCAGTATGTTATAATGGATATGACTGCTGTTGGGAACATTGATACAAGTGGAATAAGCATGCTTGAAGAGTTTAAGAAGAGTATTGATAGAAGAGGGCTACAAATGGATGATCTTATCCACCTTGAGAGGTTTAATCATGATTGCTCCAAGGAGCTTCAGGTGAATATTGCTGAGTTAAACAAAATACACTCACAAAATGTAGACTTTTTCCTTGTCCTTGATTTAGAGGGTAGGGTTGAGTCTTGA 666 0.4234 MEEVVDVDRVCAEEEAVEVQPVEESPVQAIVEVVDVDKVCVKKEAARDEVEVVKKEAVEEKIPNLEDGWEDADGMGKNCHSTHAIWKSYAFTFTTLYSQSVLIHLEHKEAEEKLDNFVHRITRWIDEEEDKSKATGKTSLQYVIMDMTAVGNIDTSGISMLEEFKKSIDRRGLQMDDLIHLERFNHDCSKELQVNIAELNKIHSQNVDFFLVLDLEGRVES. 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g00683 221 ProSiteProfiles STAS domain profile. 115 175 IPR002645 -
Seca6g00683 221 Gene3D STAS domain 93 212 IPR036513 -
Seca6g00683 221 Pfam STAS domain 115 175 IPR002645 -
Seca6g00683 221 SUPERFAMILY SpoIIaa-like 132 175 IPR036513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g00683 Seca-Chr6 22879521 22882045 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g00683 120 175 Inorganic Solute Cotransporters AT4G02700 66.071 3.14e-19 84.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g00683 K17471 - gmx:100791091 98.2117