Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g00674 ATGGCGGCTACTGTATCTGCGTGGTCTAAACCCGGGGCTTGGGCTCTGGATTCCGAGGAACACGAAGCTGAACTTCTTCAACAGAACCACCACGAAGAAACCACCAAGCCACTCGCCGACTTCCCTTCCCTCGCCGTCGCCGCCGCCACTAAACCCAAGAAGAAGAAAGGCCAAACCGTTTCTTTGGCCGTCTTCAACGCCAACCCCGACGCCGCCTTCACTCAACACTACCAAGATCCCGTCGACCTCCCCACTGGTCCTCGCCAGCGAACCGCCGAGGAACTCGCCTCCGACCGGAATCGCCTCGGCGGCGGCTTCAGGTCATACGGTGACCGCCCCCATCGGAATTCCGGCGGCGACGAGTCTTCCAATTCCAGATGGGGTTCTTCTAGGGTTTCTGATGAACCTAGGCGAAACGGTTCGTTTGGGTCTAGGGATTCGAATCGCGAGTTGGCACCGTCTCGTGCTGATGAAATTGATAATTGGGCTGCTGCCAAGAAATCGACTGGGAATGGGTTCGAGAGGAGGGAGAGGGAAAGGGATAGAGGTGGATTTTTCGATTCACAGTCGCGTGCTGATGAATCGGACAGTTGGGTTTCCAGTAAGAACTTTGTGCCGTCGGAGGGGAGGAGATTTGGTTCCGGCGGTGGTGGTGGGTTTGAGAGAGAGAGGAAGGTAGGGTTTGGTACCAGCGGTGGTGCGGATTCGGATAATTGGAACAAGAAGAAGGGTGAAATTAGCGTTGGAAGTGAAAGAACCGAGAGTGGTTTTGGTGGAAGGCCAAGGCTTGTGTTGCAACCTAGGTCACAGTCGGTGAGTAATGAGAAAGAGGAAAGTGCTTCTGGGAATGTGGCAAAACCTAAGGGTTCAACAAATCCATTTGGAGAGGCAAGGCCTAGGGAGCAAGTTTTGGCTGAGAAAGGACAGGATTGGAAGAAGATTGATGAGCAACTTGAGAACATGAAGATTAAGGACACTGTGGCGGTGGATGCGGTTGGGAAGAGGGGTTTTGGGTCTGGTAATGGACGTGCCAGTTTGCCAGAAGATAGGACTGAGAGGAGTTGGAGGAAGGCCCTATCTGATGATGGTCGTCCAAAAAGTGCTGAGAAAGTGGAGGATGAACACGTTGAAGAAAACTGA 1140 0.5333 MAATVSAWSKPGAWALDSEEHEAELLQQNHHEETTKPLADFPSLAVAAATKPKKKKGQTVSLAVFNANPDAAFTQHYQDPVDLPTGPRQRTAEELASDRNRLGGGFRSYGDRPHRNSGGDESSNSRWGSSRVSDEPRRNGSFGSRDSNRELAPSRADEIDNWAAAKKSTGNGFERRERERDRGGFFDSQSRADESDSWVSSKNFVPSEGRRFGSGGGGGFERERKVGFGTSGGADSDNWNKKKGEISVGSERTESGFGGRPRLVLQPRSQSVSNEKEESASGNVAKPKGSTNPFGEARPREQVLAEKGQDWKKIDEQLENMKIKDTVAVDAVGKRGFGSGNGRASLPEDRTERSWRKALSDDGRPKSAEKVEDEHVEEN. 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g00674 379 MobiDBLite consensus disorder prediction 346 379 - -
Seca6g00674 379 MobiDBLite consensus disorder prediction 190 204 - -
Seca6g00674 379 MobiDBLite consensus disorder prediction 170 189 - -
Seca6g00674 379 Pfam Plant specific eukaryotic initiation factor 4B 7 323 IPR010433 GO:0003743
Seca6g00674 379 MobiDBLite consensus disorder prediction 120 137 - -
Seca6g00674 379 MobiDBLite consensus disorder prediction 70 309 - -
Seca6g00674 379 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B 1 368 IPR010433 GO:0003743
Seca6g00674 379 Coils Coil 16 36 - -
Seca6g00674 379 MobiDBLite consensus disorder prediction 332 379 - -
Seca6g00674 379 MobiDBLite consensus disorder prediction 138 162 - -
Seca6g00674 379 MobiDBLite consensus disorder prediction 266 288 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g00674 Seca-Chr6 22160263 22162819 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g00674 1 360 Eukaryotic Initiation Factors Gene Family AT4G38710 50.249 6.51e-69 222
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g00674 - - pvu:PHAVU_011G033300g 528.865