Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g00626 ATGGCCCCAGAGGTTATAGAAATGTCTGGGGTTTGTGCAGCTTCTGACATTTGGAGTGTTGGTTGTACGGTTATTGAACTTCTTACATGTGTGCCTCCTTATTATGATTTGCAGCCTATGCCAGCTCTTTTCCGTATTGTCCAGGATGAGCATCCTCCTATTCCTGATAGCCTTTCACCTGACATTACTGATTTTCTGCATCAATGCTTTAAGAAGGATGCTAGACAAAGGCCTGATGCTAAAACGCTGCTGTCTCACCCATGGATTCAAAACTGTAGACGTGCCCTGCAGTCTTCACTTCGTCATAGTGGAACATTAAGAAATATAGAGGAAGATGGTTCTGCAGATGCTGAAGTTTCTGGTGGTGAGCATAAGAGCATTGGTGCAAGCTCTTCTATGGAGAAAGAGGGCTCTGCAAAAGAGTTTTCAACTGTAGCTGCTGATAGCAGCAAATCTCATGAAGACAATGCTTCAGATTCTAATGCTCCCAATGAAAGAACAGAGAAAGCAGATGATGTTCCATCAGATCAGGTTCTCACCTTAGCCATTCGTGAGAAGTCATTTCTACAAACTGGTTCTAGCAAACTTTCTTCTAATAGAGAAATGGATAGTTCTGAGCCAACTGGCAATCATGAAATTTCAAATGCAAAAGACCTTCATGAAGTCATGATGAATGGAGAAGTTGGATCTCCACAATCAAGAGGAATGGCTAGTAAGGTTGTAGGAAAAGACAGTTCTATCAATAATGGCAATAAATCATTTGCTTTTGGCCCAAGAGGTCAAGATAATGGTTCCCTAAAGGCAATGAAAATACCACCCCCTGTAGAAGGAAATGAGCTGAGTAGATTTAGTGACCCTCCTGGAGATGCCTACTTGGATGATTTATTTCATCCGTTAGATAAACAACCTGGGGAAGTTGTCGCTGAGGCATCCACATCTACATCCACTTCACATACGGCTAAAGGTAATGCATCTATGATTGATGGTGGGAAAAATGACCTGGCGAAAGAGTTGAGGGCTACAATTGCTCGAAAGCAATGGGAGAAAGAAAGTGAAATTGGACAGGCAAACAATGGTGGGAACCTTTTACACCGAGTGATGATAGGTGTTCTAAAAGATGACGTGATTGATATAGATGGTTTGGTCTTTGATGAAAAACTTCCTGGAGAAAATCTTTTTCCTCTGCAGGCCGCTGAGTTCAGCAAATTAGTTGGTTCATTAAAACCAGAGGAATCAGAAGATGTGGTTGTCTCTGCATGTCAGAAACTTATTGGAATATTTAACCAACGCCCAGAGCAGAAGATTGTTTTTGTTACACAGCATGGTTTACTTCCTCTAACTGACTTGCTAGAAGTTCCTAAAACACGCGTCATATGTTCTGTGCTTCAGCTTATAAATCAAATAATCAAAGACAACACTGATTTTCAAGAAAACGCATGTCTTGTTGGGTTGATTCCTGCAGTCATGAGCTTTGCAGTACCTGATCGTCCCCGAGAGATTCGTATGGAAGCAGCTTATTTTTTACAGCAGCTTTGTCAGTCAAGTTCTTTGACATTACAAATGTTTATAGCTTGTCGTGGAATACCTGTTTTGGTGGGATTTCTCGAGGCTGATTATGCGAAGTACAGGGAGATGGTTCATCTGGCTATTGATGGCATGTGGCAGGTGTTTAAGCTTCAGCAGTCAACACCTAGAAATGATTTCTGTCGGATAGCTGCAAAAAATGGAATACTTCTTAGGCTTATAAATACTCTTTATAGCTTAAATGAGTCAACTCGATTAGCTTCTATGTCTGTTGGGGGTGGAATTTTGGTTGATGGTTCAGCTCAACGGCCTCGTTCTGGTATATTGGATCCCACGCACCCTTTTATGAATCAGAACGAGGCAGTAGATCAGCAAGATCTCTCTAAAGTGAGGCGTGGAGTACTTGATCATCACTCAGAAACTTCACATGCTTCATCCTCCAATCCTCGAAGATCTGATGCTAACTACCCCATGGATGTTGATAGGCCTCAATCAAGCAATGTAGCAGCTGAAGTTATGTCACTAGAGAAGAGTTCAAATCTAGCATCCAGGGAATCTTCAGCTGGTGCATTGAAAGAGCGAGAGAATATGGATCGTTGGAAAACTGATCCTTCTCGAGCTGATGTTGAACCCAGACTGCAGCGTATCAGTATTTCTGCTAACAGGACATCAACGGATAGGCCTCCAAAATCAACAGAACCTTCATCGAATGGTTTATCAGTTACAGGAGCTATACAGCAAGAGCAAGTTAGGCCTCTTCTTAGCTTGTTGGAGAAAGAGCCCCCATCTGGACGTTTTTCTGGGCAGCTTGAGTATGTACGTCAGTTTTCAGGATTAGAAAGACATGAAAGTGTACTCCCTTTGTTACATGCCTCTGAAAAGAAAACAAATGGTGAACTAGACTTTTTGATGGCAGAATTTGCAGATGTTTCTCAACGTGGAAAGGAAAATGGAAATCTTGACTCCAGTGCTAGAGTGTCTCACAAAGTCACTCCCAAGAAATTAGGGACTTTTGGTTCTAGTGAAGGAGCTGCTTCCACATCTGGGATTGTATCTCAGACAGCATCAGGTGTACTGTCTGGTTCAGGTGTTCTGAATGCTAGACCAGGTAGTGCTACTTCGTCTGGGCTACTTTCCCACATGGTTTCATCATTGAATGCAGAGGTTGCAAGAGAATACCTTGAAAAAGTCGCAGATCTTCTGCTTGAGTTTGCACAAGCTGACACAACAGTGAAGTCTTACATGTGTAGCCAAAGCTTGCTCAGTCGTCTTTTCCAGATGTTTAATAGGGTGGAGCCTCCTATTTTGTTGAAGATACTGAAGTGTATTAATTATCTGTCAACGGATCCAAATTGCTTAGAAAATCTTCAGCGTGCTGAAGCCATCAAATACTTGATACCAAATCTTGAACTCAAAGAAGGGTCTCTTGTATCAGAGATACACCATGAGGTCCTGAATGCACTGTTCAATTTATGCAAGATAAATAAGAGGAGACAAGAACAAGCAGCTGAAAATGGAATCATTCCCCATTTGATGCAATTTATCACATCAAATTCTCTCCTGAAACAATATGCATTGCCTCTGCTATGTGACATGGCTCATGCATCTCGCAACTCAAGGGAGCAGTTAAGAGCTCATGGTGGTTTGGACGTATATTTGAACCTTCTTGAGGATGAGCTTTGGTCTGTGACTGCACTAGATTCAATTGCAGTTTGCCTGGCCCATGACAATGACAATAGGAAGGTTGAACAAGCATTGTTGAAAAAGGATGCGGTTCAGAAGCTTGTGAAGTTCTTCCAGTGCTGTCCAGAGCAGCATTTTGTACACATATTGGAGCCATTCTTGAAAATCATCACAAAATCTGCCCGGATCAATACTACATTGGCTGTTAATGGATTAACACCATTGCTAATTGCAAGGCTTGATCATCAGGATGCTATAGCTCGTCTTAATTTACTCAGGCTAATAAAGGCTGTTTATGAGCATCACCCTCATCCCAAGAAGCTGATTGTGGAGAATGATCTACCTGAGAAACTTCAAAACTTGATAGGGGAACGGAGAGATGGACAGGTGTTGGTCAAACAGATGGCTACTTCATTACTTAAAGCTCTACACATAAACACCGTTTTGTAA 3657 0.4192 MAPEVIEMSGVCAASDIWSVGCTVIELLTCVPPYYDLQPMPALFRIVQDEHPPIPDSLSPDITDFLHQCFKKDARQRPDAKTLLSHPWIQNCRRALQSSLRHSGTLRNIEEDGSADAEVSGGEHKSIGASSSMEKEGSAKEFSTVAADSSKSHEDNASDSNAPNERTEKADDVPSDQVLTLAIREKSFLQTGSSKLSSNREMDSSEPTGNHEISNAKDLHEVMMNGEVGSPQSRGMASKVVGKDSSINNGNKSFAFGPRGQDNGSLKAMKIPPPVEGNELSRFSDPPGDAYLDDLFHPLDKQPGEVVAEASTSTSTSHTAKGNASMIDGGKNDLAKELRATIARKQWEKESEIGQANNGGNLLHRVMIGVLKDDVIDIDGLVFDEKLPGENLFPLQAAEFSKLVGSLKPEESEDVVVSACQKLIGIFNQRPEQKIVFVTQHGLLPLTDLLEVPKTRVICSVLQLINQIIKDNTDFQENACLVGLIPAVMSFAVPDRPREIRMEAAYFLQQLCQSSSLTLQMFIACRGIPVLVGFLEADYAKYREMVHLAIDGMWQVFKLQQSTPRNDFCRIAAKNGILLRLINTLYSLNESTRLASMSVGGGILVDGSAQRPRSGILDPTHPFMNQNEAVDQQDLSKVRRGVLDHHSETSHASSSNPRRSDANYPMDVDRPQSSNVAAEVMSLEKSSNLASRESSAGALKERENMDRWKTDPSRADVEPRLQRISISANRTSTDRPPKSTEPSSNGLSVTGAIQQEQVRPLLSLLEKEPPSGRFSGQLEYVRQFSGLERHESVLPLLHASEKKTNGELDFLMAEFADVSQRGKENGNLDSSARVSHKVTPKKLGTFGSSEGAASTSGIVSQTASGVLSGSGVLNARPGSATSSGLLSHMVSSLNAEVAREYLEKVADLLLEFAQADTTVKSYMCSQSLLSRLFQMFNRVEPPILLKILKCINYLSTDPNCLENLQRAEAIKYLIPNLELKEGSLVSEIHHEVLNALFNLCKINKRRQEQAAENGIIPHLMQFITSNSLLKQYALPLLCDMAHASRNSREQLRAHGGLDVYLNLLEDELWSVTALDSIAVCLAHDNDNRKVEQALLKKDAVQKLVKFFQCCPEQHFVHILEPFLKIITKSARINTTLAVNGLTPLLIARLDHQDAIARLNLLRLIKAVYEHHPHPKKLIVENDLPEKLQNLIGERRDGQVLVKQMATSLLKALHINTVL. 1219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g00626 1218 SMART arm_5 957 1001 IPR000225 GO:0005515
Seca6g00626 1218 SMART arm_5 1003 1042 IPR000225 GO:0005515
Seca6g00626 1218 SMART arm_5 430 470 IPR000225 GO:0005515
Seca6g00626 1218 MobiDBLite consensus disorder prediction 641 670 - -
Seca6g00626 1218 Gene3D - 391 625 IPR011989 -
Seca6g00626 1218 SUPERFAMILY ARM repeat 1087 1210 IPR016024 -
Seca6g00626 1218 MobiDBLite consensus disorder prediction 184 212 - -
Seca6g00626 1218 Gene3D Transferase(Phosphotransferase) domain 1 1 108 - -
Seca6g00626 1218 ProSiteProfiles Protein kinase domain profile. 1 89 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca6g00626 1218 MobiDBLite consensus disorder prediction 245 266 - -
Seca6g00626 1218 FunFam MAP3K epsilon protein kinase 1 394 608 - -
Seca6g00626 1218 MobiDBLite consensus disorder prediction 125 151 - -
Seca6g00626 1218 MobiDBLite consensus disorder prediction 648 670 - -
Seca6g00626 1218 MobiDBLite consensus disorder prediction 696 718 - -
Seca6g00626 1218 MobiDBLite consensus disorder prediction 724 751 - -
Seca6g00626 1218 SUPERFAMILY Protein kinase-like (PK-like) 1 90 IPR011009 -
Seca6g00626 1218 MobiDBLite consensus disorder prediction 152 173 - -
Seca6g00626 1218 SUPERFAMILY ARM repeat 402 1109 IPR016024 -
Seca6g00626 1218 Gene3D - 873 1215 IPR011989 -
Seca6g00626 1218 Pfam Protein kinase domain 1 89 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca6g00626 1218 PANTHER ARMADILLO REPEAT-CONTAINING PROTEIN 3 476 1190 - -
Seca6g00626 1218 MobiDBLite consensus disorder prediction 682 751 - -
Seca6g00626 1218 FunFam MAP3K epsilon protein kinase 1-like 872 1213 - -
Seca6g00626 1218 MobiDBLite consensus disorder prediction 111 218 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g00626 Seca-Chr6 18909426 18939388 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g00626 1 1218 MAP Kinase Kinase Kinase AT3G13530 68.790 0.0 1634
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE-Pl Seca6g00626 Pkinase 9.1e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g00626 - - lja:Lj3g3v3513490.1 2168.27