Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g00610 ATGGCTTATAGAATTTCAAGTATCACTAGTTTTGTTGCCATCACGTTGTTGTTGTTAGGCACAATATCAATATGTGATGCACAATTGTCTTCTTCCTTTTATGACAGTACATGCCCAAACGCACTAAGCACTATCAGAACTGTGATTCGTACTTCAGTTTCTAAAGAGCGTCGCATGGCTGCATCTCTCATTCGCCTTCACTTTCATGACTGCTTTGTTCAGGGTTGTGATGCATCAATATTGCTTGATGATAGCGGCAGTATCGAGAGCGAAAAGAGTGCACTTCCGAATGTAAATTCAGTGAGGGGATTTGAAGTCATTGATAAAGCAAAAGCTGAGGTTGAGAAACTATGCCCTGGCGTTGTCTCATGTGCTGACATCGTCGCAGTAGCAGCGCGTGATGCATCATTCGCTATAAGCATTAAAGCATATATTAATGACTTATCATATTTTTTTCATAATCAAGTGGGTGGTCCATCATGGACTGTGAAACTTGGACGGAGAGACTCTACCACCGCAAGTAAAAGTTTGGCTAATAGTGACCTTCCATTATTTACCGATGACCTTGAAACTCTTATTTCTCGTTTTATCAAGAAAGGACTCAGTGCCAGAGACATGGTTACTCTATCTGGTGCCCATACAATCGGACAAGCTCAGTGCTTCACATTTCGTGGGAGGATATATAACAATGCAAGTGACATTGATGCTGGATTTGCTAGAACCCGCCAACGTGGTTGTCCATCTTCCAGTAGCCCTGACAACAATAAGAAGCTGGCAGCACTAGACTTGGTCACACCCAATTCTTTTGACAATAACTACTTCAAGAACTTAATTCAGAAGAAAGGTCTTCTTCAATCAGATCAAGTTCTATTTAGTGAAGGATCTACAGATTCTATTGTGACCGAATATAGCAAAAATCCTACCACATTTAAGTCTGAGTTTGCAGCTGCTATGATAAAGATGGGAGATATTGAACCGCTAACCGGGTCAGCTGGGATAATAAGAAGGATTTGCAGTGCTATCAACTAA 1029 0.4111 MAYRISSITSFVAITLLLLGTISICDAQLSSSFYDSTCPNALSTIRTVIRTSVSKERRMAASLIRLHFHDCFVQGCDASILLDDSGSIESEKSALPNVNSVRGFEVIDKAKAEVEKLCPGVVSCADIVAVAARDASFAISIKAYINDLSYFFHNQVGGPSWTVKLGRRDSTTASKSLANSDLPLFTDDLETLISRFIKKGLSARDMVTLSGAHTIGQAQCFTFRGRIYNNASDIDAGFARTRQRGCPSSSSPDNNKKLAALDLVTPNSFDNNYFKNLIQKKGLLQSDQVLFSEGSTDSIVTEYSKNPTTFKSEFAAAMIKMGDIEPLTGSAGIIRRICSAIN. 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g00610 342 ProSiteProfiles Plant heme peroxidase family profile. 28 342 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca6g00610 342 PRINTS Haem peroxidase superfamily signature 262 277 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca6g00610 342 PRINTS Haem peroxidase superfamily signature 60 74 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca6g00610 342 PRINTS Haem peroxidase superfamily signature 122 139 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca6g00610 342 PRINTS Haem peroxidase superfamily signature 205 220 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca6g00610 342 SUPERFAMILY Heme-dependent peroxidases 28 342 IPR010255 GO:0004601|GO:0006979|GO:0020037
Seca6g00610 342 PANTHER PEROXIDASE 72-RELATED 25 339 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca6g00610 342 Gene3D - 32 342 - -
Seca6g00610 342 PRINTS Plant peroxidase signature 62 82 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca6g00610 342 PRINTS Plant peroxidase signature 157 172 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca6g00610 342 PRINTS Plant peroxidase signature 38 57 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca6g00610 342 PRINTS Plant peroxidase signature 260 275 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca6g00610 342 PRINTS Plant peroxidase signature 204 216 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca6g00610 342 PRINTS Plant peroxidase signature 316 329 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca6g00610 342 PRINTS Plant peroxidase signature 276 293 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca6g00610 342 Pfam Peroxidase 46 306 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca6g00610 342 ProSitePatterns Peroxidases proximal heme-ligand signature. 205 215 IPR019793 -
Seca6g00610 342 ProSitePatterns Peroxidases active site signature. 60 71 IPR019794 GO:0004601
Seca6g00610 342 Gene3D Peroxidase, domain 2 183 321 - -
Seca6g00610 342 CDD secretory_peroxidase 28 341 IPR033905 GO:0004601|GO:0042744
Seca6g00610 342 FunFam Peroxidase 183 321 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g00610 Seca-Chr6 18487490 18492362 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g00610 11 342 Peroxidase AT1G14550 64.671 8.45e-154 433
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g00610 K00430 - gmx:100811641 545.814