Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g00602 ATGTGTGGGATCTATTTTGAAACCCTTTTTGGTGATAAGATTGGGTCAGCAGAGTGTGGACATCCATTTTGCATGATTTGTTGGATGCGCTATGTGGATACGAAGATTGACGAGGGTCCTTATAAGTGCTTGACACTTAGATGCCCCGAACCCTTTTGTGGTGCAGTTGTGGATGGAGACATGGTTCACAAACTTGCAAGTGAATCAAGTATATGTCAAACAATTCAATTTCAAGAGACTAGCAAAGAGGAACTAAAAAGTAAGATGTCAAGGGGTTATTTTGATAGGTACATTTACTATTATCATCATTGGGCTAGAAATGATGCTTTAAGAAAAAATGTCATTGAAAATTTGATTTACCTTACACCTATAAAAAGACTATGTAGGTTGTTTCAAAAGCCTTCAACTGATTTTAATTTTATAATTGAGGCTTGGAAACAAGTGATTGAATGTAGAGGGGTACTAAAATGGTGTTATACATATGGATATTATCTCCCTAATGATATAAAGGTCAAGAAGGACTTTTTTGAGTACATCCAACATAAGGCTGAGGTTACTTTCGAAAAGCTTGATCAATGTGTAGGAATGGAACTGGAAGGGAATCTAAATGTTAAGCGAAAAGATGACTTAAATGATTTTTGTTTGAAGGTAGTCCAATTGACTAATGTGACCAAGAATTATTTTGACAAGCTGGTGAAAGCGTTAGAGGATGGCCTAGCTGATGTGCACGTGAATAACAACATGAGGGTGAAAAGAAAATCAACTGAGATAGGTGAGACCTCTAATCAAAGGGGGACCAAGAGAATAATTACCATTGATGGACTGACCGATGATGATCTTTGGCAATGTGAGGCATGTGGTCATTACAATTTTGCCGCTTCTCCTGTATGTCAGGATACTAATTGCAGACAATACTCTGATTAA 924 0.3712 MCGIYFETLFGDKIGSAECGHPFCMICWMRYVDTKIDEGPYKCLTLRCPEPFCGAVVDGDMVHKLASESSICQTIQFQETSKEELKSKMSRGYFDRYIYYYHHWARNDALRKNVIENLIYLTPIKRLCRLFQKPSTDFNFIIEAWKQVIECRGVLKWCYTYGYYLPNDIKVKKDFFEYIQHKAEVTFEKLDQCVGMELEGNLNVKRKDDLNDFCLKVVQLTNVTKNYFDKLVKALEDGLADVHVNNNMRVKRKSTEIGETSNQRGTKRIITIDGLTDDDLWQCEACGHYNFAASPVCQDTNCRQYSD. 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g00602 307 SUPERFAMILY RING/U-box 12 71 - -
Seca6g00602 307 Gene3D - 12 242 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g00602 Seca-Chr6 17923086 17924399 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g00602 2 68 ARIADNE family AT1G65430 55.224 2.72e-18 83.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g00602 K11968 - mnt:21387087 167.548