Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g00587 ATGCATTTCCACATTTCCTATCACTCCAACACCATGACCAAACCAAGCAATCTCAACCTCACCTCCTCCTCCTCCTACTACCACCTTGGTGCCACCAGAAACTTCTATTCCCTTAGCCTCTTCCTCCTCCAAGACATCCAATTTTTTGAAATTCTCATTGCAATTTCTGTCTTCATAGTCATTCATTCCCTTAGACAAAAGAAGCATCATGGCCTCCCCATTTGGCCTATTCTTGGAATGTTACCTTCTTTGGTCTCAGGACTCAGAACCAACATGTATGAATGGATCACAGATGTTCTTAATAGAAAAAATGGCACTTTTAGATTCAAAGGGCCATGGTTTAGCAGCCTCAACAGTATTGTCACCTCTGATCCTCGCAACATAGAGCATCTTCTCAAAACCAAATTCTCTGTCTTCCCTAAAGGAAGTTACTTCAGAAACACAGCTAGAGACCTACTTGGAGATGGCATATTCAATGCAGATGATGAGACATGGCAAAAGCAAAGGAAAACAGCAAGCCTTGAGTTCCATTCAACCAAGTTTAGACAACTAACAACTGAGTCGTTATTGGAACTTGTCCATTCAAGGCTCTTACCTGTGTTAGAATCATCAGTTAAGAAATCTGTTGCAATAGACCTTCAAGACATTCTATTAAGGCTAACTTTTGATAATGTGTGCATGATAGCCTTTGGTGTTGATCCTGGTTGTTTGCAACTTGGATTGCCTGAGATACCATTTGCAAGAGCCTTTGAGGATGCAACAGAAGCCACACTGCTTCGTTTTGTTACCCCAACTTTCATATGGAAGGCCATGAGGTTTCTCAACTTGGGGATGGAAAAGAAGCTGAAGGAATCAATAAAAGGGGTTGATGAGTTTGCTGAGAGTGTTATTAGGACTAGAAAGAAAGAACTCTCTTTGCAATTTGAGGAGAAGAAGCAAAAATCAGACTTATTAACTGTGTTTATGAAGATGAAGGATGAGAATGGAAAACCATATTCAGATAAGTTCTTGAGGGATATTTGTGTGAACTTCATATTAGCAGGGAGGGATACTTCTTCAGTAGCTTTGAGTTGGTTTTTTTGGTTGCTTGATAAGAATCCTGTGGTGGAGGAGAAGATAGTAGCAGAGATATGCAGGGTAGTGAGTCACAGGGAAGGGATAAAGAAGGAAGATTTTGAGAATTCATTGACATTTAGGCCAGAGGAGATTAAAAAGATGGATTATTTGCATGCTGCTTTATCAGAAGCTCTGAGATTATACCCTTCTGTGCCTGTGGATCACAAGGAGGTAGTTAAAGATGTTACTTTCCCCGATGAAACAGTGTTAAAGAAAGGGACTAAAGTTATATATGCAATTTATGCAATGGGAAGAATGGAAGGCATATGGGGTAAGGACTGCAGGGAGTTCAAGCCAGAGAGATGGTTAAGAGATGGCCGTTTCATGAGTGAGTCTGCCTACAAATTCACTGCCTTCAATGGTGGACCTCGCCTATGCTTAGGCAAAGATTTTGCATACTACCAAATGAAATATGTTGCAGCAAGTATCATATATCGTTACCATGTGAAGGTGGTAGAGAACCACCCTGTGGTGCCAAAGCTTGCTTTAACTATGTACATGAAGCATGGATTGAGAGTTAACCTCTACAAGAGGGATGCTATGGAAATTCAAATGCACTTGGAAGATTAG 1686 0.4075 MHFHISYHSNTMTKPSNLNLTSSSSYYHLGATRNFYSLSLFLLQDIQFFEILIAISVFIVIHSLRQKKHHGLPIWPILGMLPSLVSGLRTNMYEWITDVLNRKNGTFRFKGPWFSSLNSIVTSDPRNIEHLLKTKFSVFPKGSYFRNTARDLLGDGIFNADDETWQKQRKTASLEFHSTKFRQLTTESLLELVHSRLLPVLESSVKKSVAIDLQDILLRLTFDNVCMIAFGVDPGCLQLGLPEIPFARAFEDATEATLLRFVTPTFIWKAMRFLNLGMEKKLKESIKGVDEFAESVIRTRKKELSLQFEEKKQKSDLLTVFMKMKDENGKPYSDKFLRDICVNFILAGRDTSSVALSWFFWLLDKNPVVEEKIVAEICRVVSHREGIKKEDFENSLTFRPEEIKKMDYLHAALSEALRLYPSVPVDHKEVVKDVTFPDETVLKKGTKVIYAIYAMGRMEGIWGKDCREFKPERWLRDGRFMSESAYKFTAFNGGPRLCLGKDFAYYQMKYVAASIIYRYHVKVVENHPVVPKLALTMYMKHGLRVNLYKRDAMEIQMHLED. 562
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g00587 561 PRINTS E-class P450 group I signature 356 382 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g00587 561 PRINTS E-class P450 group I signature 410 428 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g00587 561 PRINTS E-class P450 group I signature 336 353 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g00587 561 PRINTS E-class P450 group I signature 498 521 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g00587 561 PRINTS E-class P450 group I signature 488 498 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g00587 561 FunFam Cytochrome P450 63 553 - -
Seca6g00587 561 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 491 500 IPR017972 GO:0005506|GO:0016705
Seca6g00587 561 Gene3D Cytochrome P450 66 559 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g00587 561 Pfam Cytochrome P450 72 535 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g00587 561 PANTHER CYTOCHROME P450 61 544 - -
Seca6g00587 561 SUPERFAMILY Cytochrome P450 71 550 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g00587 561 CDD CYP86A 107 543 - -
Seca6g00587 561 PRINTS P450 superfamily signature 489 498 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g00587 561 PRINTS P450 superfamily signature 411 422 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g00587 561 PRINTS P450 superfamily signature 347 364 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g00587 561 PRINTS P450 superfamily signature 498 509 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g00587 Seca-Chr6 17491784 17495181 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g00587 12 558 Cytochrome P450 AT5G23190 72.232 0.0 822
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g00587 K15402 - gmx:100809503 944.495