Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g00586 ATGAACAGCGTGAGCGAGCACCGTGCTCGAATTAAGATGTCGAATGTGCATGGAGATTCCAACATGACTATTTGTGATAATAGTCTTGAAAGTGCTCTTAATATGGACCACCATAATTCTGGATTGCCATTAGAGCCTTACTTAGAGCCTTATGAAGGAATGAAATTTACATCAATTGAAGATGCAAAGAATCACTATACCAGGTATGCAAAAAATAAAGGTTTTAGCTTTCGCATTGGTCGTATTACTAAATCAAGAACAAATGGTATGATGATTGGTCAAGAGTTCCTTTGTTCAAAGGAGGGGTTTCGAAAAAAAAATGGAGAAATGGTAGATAGTAGCATTTCAGCAAGTGATGAAACAAGGTTAAGATGCTAG 378 0.3704 MNSVSEHRARIKMSNVHGDSNMTICDNSLESALNMDHHNSGLPLEPYLEPYEGMKFTSIEDAKNHYTRYAKNKGFSFRIGRITKSRTNGMMIGQEFLCSKEGFRKKNGEMVDSSISASDETRLRC. 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g00586 125 Pfam FAR1 DNA-binding domain 65 125 IPR004330 -
Seca6g00586 125 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 15 112 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g00586 Seca-Chr6 17462217 17463255 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca6g00586 FAR1 4.6e-10 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g00586 - - psat:127129645 135.961