Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g00517 ATGGATAATTCTGAAACTGTTTCTGGGTTTAAATTGGAAGATGATATAGATCCTATATTTGATTCTGGGTGTGATGTTAGTGTTAGTGTTAGTGTGGAGGATAGTGAAGTGTCTGAGAAGAATGAAAAAGTAAACATTGATGTAGGAGAAGGTCAGTTTAGAAAGATTTTTGACTTAACTGCTGATGAATTTCGGTGCCTTGATTTTGCTAGTGAAAAAGAAGCATATCATTATTATGAGTTATATGCAAAATATAACAGGTTTGTGGTTAGAAAAGATGATGTAATCAGGGATATTAGAGGGAATATTATTATGTGTCAGTTTGTTTGCAATAAGGAGGGATTAAGGTGCAAGAAGCACTTTATGAGGATGGATAGGAAGAGAGAGCATAGGCCACTTACCCGTACAAACTACCAAGCTAAGTTGTACACTATGATTTCAAGATTTTAA 450 0.3444 MDNSETVSGFKLEDDIDPIFDSGCDVSVSVSVEDSEVSEKNEKVNIDVGEGQFRKIFDLTADEFRCLDFASEKEAYHYYELYAKYNRFVVRKDDVIRDIRGNIIMCQFVCNKEGLRCKKHFMRMDRKREHRPLTRTNYQAKLYTMISRF. 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g00517 149 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 8 142 - -
Seca6g00517 149 Pfam FAR1 DNA-binding domain 78 143 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g00517 Seca-Chr6 15491807 15492256 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca6g00517 FAR1 1.3e-07 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g00517 - - ccaj:109792835 127.487