Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g00510 ATGATCAGCGCAAAAAGGCTTACAGAAATGGCAAGGAAGTGGCAAAAATTGGCTGCTGGAAAGCGCAAGAGAATTTCATACCCAAGAAACGAAGTGGATTTGCATTCTTCAGCAGCAAACAAGGGCCATTTCGTTGTTTACAGCATCGATCATAAGCGATTTGTGGTTCCCCTTAAGTATCTTAGCACGAACATCTTCAGGGAACTTCTCAAATGGTCAGAGGAAGAGTTTGGATTACCTTCTAATGGACCAATTACGTTACCATGTGATGGTGTCTTCTTGGAATATGTGATCTCGTTGGTTCAAGAATGCATCCCGGAAGATGTGGAGAAGGCTTTGATCACTTTCATGACTGCATGTCACAACGAGGCATCATCTTCTCTTCCTCTTAGGAAAAACAATGAACGAATAATTATCTATGGCTTTTGA 429 0.4172 MISAKRLTEMARKWQKLAAGKRKRISYPRNEVDLHSSAANKGHFVVYSIDHKRFVVPLKYLSTNIFRELLKWSEEEFGLPSNGPITLPCDGVFLEYVISLVQECIPEDVEKALITFMTACHNEASSSLPLRKNNERIIIYGF. 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g00510 142 Pfam Auxin responsive protein 12 100 IPR003676 GO:0009733
Seca6g00510 142 PANTHER AUXIN-RESPONSIVE FAMILY PROTEIN 1 121 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g00510 Seca-Chr6 15261608 15262036 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g00510 3 104 Calmodulin-binding Proteins AT4G34750 34.951 7.48e-13 60.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g00510 - - ccaj:109798531 208.379