Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g00485 ATGGAACCAGTGCAGCCAGCTTCAAGAGGAGCAGAAGCACTTAAACATATGTCTCCTGGATCATCAATTTCTATTGCATACCACCCTCTTTTTGGACCTCATGATGACCTCATCTTTCTAGAGCTTGATGAGAAACTTCTCCAAGATGTTCTGCATGAGAGGGTGGTGTTAAGGGGACAGCCTGACGAAGATGCAGTACTTTGTACTCAATCCAAAACATATGCTATGAAGTTTGTTGGAACTTCCAATTCTGTTTTGCTTGTACCACCAGCTAATCTATCAGAATCTCATGAAAATCTACAAAAGAATGATAGTAATAATTATGATGAGAAAGTTGTTGCACCTGTAATCAAAGTTGTACCTGGTAATATGGAGCTTATTGAGGTTGCTCCCAGGCTTGATAAACTTAAATTGCTTCTTTCAGAGAACCCTTACAGGTTTGAGGAGTATGACATGGAAAATATAGAAGAGAATCAGGAATCTAGAACAGGATTATATAACTGGAATGATCTTAGAGACAATATTCAAGCTAGTGATGAGGAATTAAGGTCTGGGCTGCAGGCTCTTTCAGCTGTGGAGATTAATGGATATTGGAGATTAGTAGATGAGAGTTACATGGACATGATTCTGGGAATGCTTTTGAGAAATTCAGTGTTGAATGACTGGTCACTTACTGCTCTTAATGAAGATGAAGTTATCAGTATGCTGGAATCAGATGGATTTCCTGGGGTACTTGCAAGGCATTGTTTGCATGTATATGGGAAGAAAGCAAATGATTGCTTAAACAGCTGCGTCTGGAAGTTGGATGAGAAGCGGGTATGCATACACTTTGCAAGAGAAATCCTTAAAGGAGGTAAGAAGAAGTTAGAGAGTTTTATGGATGAATGGAGGCAGAAGACTCCAGATGGAATGCAGCCCACACTTGATCTTATGGAAGGAGAGGTGTTGACAGAGAGAGTTGGAGTTGAGACATGGGTTCGTTCCTTCAGTATCTCTTCGTTGCCCTCCACTCCAGCTGAACGTTTCTCCATTCTATTCAGAGAGCGGCCAAAATGGGAATGGAAAGATCTGCAGCCCTTTATCAGGGATCTGAAGGTACCGGGTCTTTCTTCAGAAGGTTTGCTACTCAAATACACTCGAAAGACACAACCATCACCTGATATGGAGCCAGTTTTCAGTGCAAGATAG 1188 0.4141 MEPVQPASRGAEALKHMSPGSSISIAYHPLFGPHDDLIFLELDEKLLQDVLHERVVLRGQPDEDAVLCTQSKTYAMKFVGTSNSVLLVPPANLSESHENLQKNDSNNYDEKVVAPVIKVVPGNMELIEVAPRLDKLKLLLSENPYRFEEYDMENIEENQESRTGLYNWNDLRDNIQASDEELRSGLQALSAVEINGYWRLVDESYMDMILGMLLRNSVLNDWSLTALNEDEVISMLESDGFPGVLARHCLHVYGKKANDCLNSCVWKLDEKRVCIHFAREILKGGKKKLESFMDEWRQKTPDGMQPTLDLMEGEVLTERVGVETWVRSFSISSLPSTPAERFSILFRERPKWEWKDLQPFIRDLKVPGLSSEGLLLKYTRKTQPSPDMEPVFSAR. 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g00485 395 PANTHER SISTER CHROMATID COHESION PROTEIN DCC1-RELATED 10 395 IPR019128 GO:0007064|GO:0031390
Seca6g00485 395 Pfam Sister chromatid cohesion protein Dcc1 39 361 IPR019128 GO:0007064|GO:0031390
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g00485 Seca-Chr6 14406491 14409039 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g00485 10 395 C3H Transcription Factor Family AT2G44580 55.357 1.61e-159 452
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g00485 K11271 - gmx:100817511 673.7