Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g00427 ATGGAAGAAACTGGCTTGCAGTGGCTGATATCCACTTCCATTTTTGTCCTCTTCTTTCTTTTTCTTTCTAATTACTTCTTCATACAAACCAACAAGCACAGAAACCTGCCACCTAGCCCACCCGCTTTACCCTTCATAGGACACCTTCATCTCTTAAAACAACCTCTCCACCGAACTCTCCACAATCTCACTCACAACTATGGCCACATATTTCTCCTCCGCTTCGGAACCCGAAACGTCGTCGTCGTTTCATCACCCTCTGCCGTAGAACAATGCTTCACGAAAAACGACATCACTTTCGCAAACCGTCCCCACACGCTTGCCGGCAAGCACCTCAATTACGATCACAAAACGGTTGGATTCGCTTCCTACGGCCATCACTGGCGCAACCTCCGCCGTCTGATGACCGTTGAGCTTCTATCCACCAAACGACTCGACATGTTCGCGAGAATTCGAGAGGAAGAGATCCAGCTGTTGGTGAAACAGCTCTTTGAAGAAAGCAAAGGACACGTGTCAAGAGTAGACGTAAGGTCGAGGCTTATGGAGGTTTCTTTCAACATCATGTTGAGGATGATATCTGGGAAACGGTATTATGGGAAGGATGTGGTGGCTAAAGAAGGGAAGGAGTTTCAGCTTCTGATGAAAGAGTTTGTGGAGCTTGTTGGGAATGGGAATTTGAATGACTTTTTGCCGATACTGCGATGGGTTGATTTTCAAGGGTTGGAAAAGAGGATGGTGAATGTGATGAAGAAGGCGGATAGATTCTTTGACAACCTCCTTGATGAGCACAGGAGAAATAGGAGAGGAAACTACCAGCACCAGGAGAGGAAAATGACTCTGATTGATGCTATGTTGGATCTGCAAGAAAACGAACCGGAATTCTACACCAATGAAACTATTAAAGGCGTTATTCTGGTAATGCTTATTGGTGGGACTGAAACTTCGGCTACTACCCTAGAATGGGCACTGACACTTCTTCTCAACAATCCAGAAGCAATGAAAAAGACAAGAGTTGAGATAGACACAAATGTAGGGCAAGATCATCTGTTGAATGAAATGGACACAACAAAACTCAAATACTTGCATAATGTAATTACCGAGACACTTCGTCTATACCCTGTGGCTCCACTCTTGATCCCTCATGAGTCCTCCAATGATTGCAATGTTTGTGGTTTTGATATACCACGAGGGACAATGCTAGTTGTGAATCTATGGACCCTACACAGGGACGCTAAGTGGTGGGTAGATCCTACAAGGTTTGAGCCAGAAAGATTTGAGGAAGGGGAAAGTAGTGGTGGTGAAGAAGTGCTGTACAATATGATTCCATTTGGAATTGGAAGGCGAGGTTGCCCGGGAGCTGCTTTGGCAAAACGTGTAATGGGACATGCATTGGGTGCCATGATTCAATCTTTTGAGTGGGACAAAATTGGGGATGAAGAAATCGACATGATTGAAGGATCAGGGCTTACCATACCCAAACTTGAACCTTTGGTGGCCTTTTGCAAGCCACGCCAAGGCATGATCAAGGTTCTATCGGATATATAA 1545 0.4518 MEETGLQWLISTSIFVLFFLFLSNYFFIQTNKHRNLPPSPPALPFIGHLHLLKQPLHRTLHNLTHNYGHIFLLRFGTRNVVVVSSPSAVEQCFTKNDITFANRPHTLAGKHLNYDHKTVGFASYGHHWRNLRRLMTVELLSTKRLDMFARIREEEIQLLVKQLFEESKGHVSRVDVRSRLMEVSFNIMLRMISGKRYYGKDVVAKEGKEFQLLMKEFVELVGNGNLNDFLPILRWVDFQGLEKRMVNVMKKADRFFDNLLDEHRRNRRGNYQHQERKMTLIDAMLDLQENEPEFYTNETIKGVILVMLIGGTETSATTLEWALTLLLNNPEAMKKTRVEIDTNVGQDHLLNEMDTTKLKYLHNVITETLRLYPVAPLLIPHESSNDCNVCGFDIPRGTMLVVNLWTLHRDAKWWVDPTRFEPERFEEGESSGGEEVLYNMIPFGIGRRGCPGAALAKRVMGHALGAMIQSFEWDKIGDEEIDMIEGSGLTIPKLEPLVAFCKPRQGMIKVLSDI. 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g00427 514 PANTHER CYTOCHROME P450 82C3-RELATED 16 504 - -
Seca6g00427 514 PRINTS E-class P450 group I signature 319 345 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g00427 514 PRINTS E-class P450 group I signature 299 316 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g00427 514 PRINTS E-class P450 group I signature 403 427 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g00427 514 PRINTS E-class P450 group I signature 64 83 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g00427 514 PRINTS E-class P450 group I signature 88 109 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g00427 514 PRINTS E-class P450 group I signature 183 201 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g00427 514 PRINTS E-class P450 group I signature 362 380 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g00427 514 PRINTS E-class P450 group I signature 450 473 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g00427 514 PRINTS E-class P450 group I signature 440 450 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g00427 514 PRINTS P450 superfamily signature 310 327 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g00427 514 PRINTS P450 superfamily signature 441 450 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g00427 514 PRINTS P450 superfamily signature 450 461 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g00427 514 PRINTS P450 superfamily signature 363 374 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g00427 514 Coils Coil 508 514 - -
Seca6g00427 514 Gene3D Cytochrome P450 28 502 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g00427 514 CDD CYP81 68 497 - -
Seca6g00427 514 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 443 452 IPR017972 GO:0005506|GO:0016705
Seca6g00427 514 FunFam Cytochrome P450 family protein 27 507 - -
Seca6g00427 514 Pfam Cytochrome P450 37 495 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g00427 514 SUPERFAMILY Cytochrome P450 37 504 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g00427 Seca-Chr6 12695087 12700250 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g00427 12 504 Cytochrome P450 AT4G37320 47.012 4.19e-164 473
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g00427 - - gmx:100794610 680.633