Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g00392 ATGCCTGTAATATATGGCCTTAATTGGTTGGCTTTAAGTCACACTCACATTCTGAATTCTTCCTTTTGCAGTCATCAAAATGTTGTGACCGTAGATGTCCATGCTGCCAAAGATTTGCTCAATTCATCTGGTTATTGTTATCTAGATGTGAGGACAGTTAAGGAATTCAGCAATAGCCATGTTGAGAATGCTCATAATGTCCCCTATATGGTCATCACGGAAGCAGGATGGGTGAAAAATCCTGATTTTGTTTGCCAGGTAGCAGCAATATGCAAGAAAGAGGATCACTTAATTGTGGTAAGAAATAATCTATAG 315 0.3873 MPVIYGLNWLALSHTHILNSSFCSHQNVVTVDVHAAKDLLNSSGYCYLDVRTVKEFSNSHVENAHNVPYMVITEAGWVKNPDFVCQVAAICKKEDHLIVVRNNL. 105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g00392 104 CDD RHOD 36 100 - -
Seca6g00392 104 PANTHER THIOSULFATE SULFURTRANSFERASE 18 23 100 IPR044684 GO:0003824
Seca6g00392 104 Gene3D - 13 103 IPR036873 -
Seca6g00392 104 ProSiteProfiles Rhodanese domain profile. 41 100 IPR001763 -
Seca6g00392 104 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 26 100 IPR036873 -
Seca6g00392 104 Pfam Rhodanese-like domain 35 100 IPR001763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g00392 Seca-Chr6 11271338 11272897 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g00392 20 99 Sulfurtransferasese or Rhodanese AT5G66170 46.341 4.51e-16 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g00392 K22547 - gmx:100794624 134.035