Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g00377 ATGGTAAACCCAAAAGTGTCCAGTCGGCCAAAGATATGCTACAGGCCTATACGACCTTCTGACCTCAACATTTTAGAGCATATCCATCTCAAACTATTTCCCATCAGGTATGAATCTACTTTTTTCCAAGATGTGGTAAATGGATGTGATATTGTGTCATGGGGAGCTGTGGACTCTAATCGGCCTGATGGCCAAAATGATGAACTTATTGGATTCGTGACAGCACGTATTGTTCTTGCAAGAGAAAGCGAGATAGTAGATATGCTTGGATATGACTCATCCAAATCAAATCAAACTTTAGTTTACATTCTGACACTAGGAGTAGTGGAAGCATATAGAAATCATGGAATTGCCTCTTCTTTGATCAGGGAGGTCATAAAATATGCTCTAAGTATTCCAACCTGCCGAGCTGTTTACTTGCACGTAATTTCTTACAATAATCCCGCAATCTTTTTGTACAAGAAAATGTCTTTCAAGTTCGTAAGAAGGCTGCAGGGATTTTATTTAATCAACGGCCAACATTATGATTCTTACCTGTTCCTGTACTATGTAAACGGGGGACGATCTCCTTGCTCACCATTAGAGCTTCTCACTGCAATATTAAGCTACATGAGGAGTGGCTTTAAGTCAATGGCTGCAAGATTGTGCAAGAGCGAAGACGGGAAAGTCTCAAGATGGGCCAAGTGTAAAGAAAGCCATTCTCTTGTATCAGTGACACATGACAAGAGAAACTTGACAGTTGAATGTACTGGATATGAGTGTGTTTAA 768 0.4023 MVNPKVSSRPKICYRPIRPSDLNILEHIHLKLFPIRYESTFFQDVVNGCDIVSWGAVDSNRPDGQNDELIGFVTARIVLARESEIVDMLGYDSSKSNQTLVYILTLGVVEAYRNHGIASSLIREVIKYALSIPTCRAVYLHVISYNNPAIFLYKKMSFKFVRRLQGFYLINGQHYDSYLFLYYVNGGRSPCSPLELLTAILSYMRSGFKSMAARLCKSEDGKVSRWAKCKESHSLVSVTHDKRNLTVECTGYECV. 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g00377 255 CDD NAT_SF 77 141 - -
Seca6g00377 255 PANTHER N-ALPHA-ACETYLTRANSFERASE 60 3 243 IPR045141 GO:0004596
Seca6g00377 255 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 12 185 IPR000182 GO:0016747
Seca6g00377 255 Pfam Acetyltransferase (GNAT) family 66 158 IPR000182 GO:0016747
Seca6g00377 255 FunFam Histone acetyltransferase MCC1 isoform A 6 187 - -
Seca6g00377 255 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 10 185 IPR016181 -
Seca6g00377 255 Gene3D - 4 187 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g00377 Seca-Chr6 10948723 10952752 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Seca6g00377 Acetyltransf_1 1.4e-12 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g00377 K22767 - gmx:100812509 443.351
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca6g00377 6 10948723 10952752 Seca6g00377 6 10948723 10952752 ECH