Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g00362 ATGCAAAAAATCATGGGAGGAGGTGTCAATGAAGAAGGTGGTGTGAGAGAAGAGGAAGAAGAGAACAAATGGCCTCCATGGCTTAAGCCACTTCTGAAGACAAGCTTCTTTGTTCAATGCAAAGTCCACACAGATTCTCACAAGAGTGAATGCAATATGTATTGTTTGGACTGTATGAATGGAGCCCTTTGCTCTGCTTGCTTGGCTTCCCACAAAGAACACAGAACAATTCAGATAAGGAGATCTTCATACCATGATGTGATAAGGGTGTCTGAGATACAGAAATTTCTGGACATAACAGGGGTCCAAACTTACATTATCAACAGTGCCAAGATTGTTTTCTTGAATGAAAGGCCTCAACCTAGGCCTGGAAAAGGGGTCACCAATACTTGCCAAGTCTGTGAGCGCAGCCTCCTTGATTCCTTCAGTTTCTGCTCTCTTGGTTGTAAGATTGTTGGAACCTCCAAGAAGTTCAGGAAGAATAAAATGTTAGGTGAGACAGATGGGTCTGATGGTGAAGAATCAATGAATGGCATCATCAGCAGCAGCAATGGAAGTGGCAGAAACAAAATGCATAGCTTCACACCTTCAACTCCACCCCCAACAGTGGTCAATTACAGAACAGCTAAGAGAAGGAAAGGAATTCCACATAGAGCTCCAATGGGGGGAGGAATCATTATACAATATTACTAA 693 0.4286 MQKIMGGGVNEEGGVREEEEENKWPPWLKPLLKTSFFVQCKVHTDSHKSECNMYCLDCMNGALCSACLASHKEHRTIQIRRSSYHDVIRVSEIQKFLDITGVQTYIINSAKIVFLNERPQPRPGKGVTNTCQVCERSLLDSFSFCSLGCKIVGTSKKFRKNKMLGETDGSDGEESMNGIISSSNGSGRNKMHSFTPSTPPPTVVNYRTAKRRKGIPHRAPMGGGIIIQYY. 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g00362 230 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 18 221 - -
Seca6g00362 230 MobiDBLite consensus disorder prediction 1 21 - -
Seca6g00362 230 MobiDBLite consensus disorder prediction 174 204 - -
Seca6g00362 230 Pfam PLATZ transcription factor 80 151 IPR006734 -
Seca6g00362 230 MobiDBLite consensus disorder prediction 165 204 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g00362 Seca-Chr6 10484475 10486563 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Seca6g00362 PLATZ 3.7e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g00362 - - gmx:100810757 386.341
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca6g00362 6 10484475 10486563 Seca6g00362 6 10484475 10486563 ECH