Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g00356 ATGGCTGCTGCTGACAACACCAACCCAAAGGATTATTACAAAGTGCTGGAGGTTGATTATGACGCAACAGATGAAAATATCAGATTAAGTTACCGAAGACTTGCACTGAAATGGCATCCTGACAAGCACAAGGGTGACAGCGATGTTACTGCAAAATTTCAAGAGATTAATGAAGCTTACAATGTATTGAGTGATCCTGCCAAGCGTTTGGACTATGATTTAACTGGGATATGTGAGATTGACAAGTATAGCTTGCAGGAATATCTTGCTAGATTTAAAGGAATGATTCTTACCTGCAATGGACTTGGCATCAATCATACAGACAGATGGTATTTTTTTTTCCCCTGTCTTTCTATTCTCTCTTATTCTACTGTAGAGGTGGAATTCACCAGCCATAAGTCCTTTGATGTAAGAATAACACTGCCTGTCAATCCACAGAATTCAAAATGA 450 0.3889 MAAADNTNPKDYYKVLEVDYDATDENIRLSYRRLALKWHPDKHKGDSDVTAKFQEINEAYNVLSDPAKRLDYDLTGICEIDKYSLQEYLARFKGMILTCNGLGINHTDRWYFFFPCLSILSYSTVEVEFTSHKSFDVRITLPVNPQNSK. 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g00356 149 ProSiteProfiles dnaJ domain profile. 11 76 IPR001623 -
Seca6g00356 149 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 4 107 - -
Seca6g00356 149 Gene3D DnaJ domain 1 89 IPR036869 -
Seca6g00356 149 SUPERFAMILY Chaperone J-domain 8 105 IPR036869 -
Seca6g00356 149 Pfam DnaJ domain 11 73 IPR001623 -
Seca6g00356 149 SMART dnaj_3 10 68 IPR001623 -
Seca6g00356 149 FunFam Chaperone protein DNAj, putative 3 90 - -
Seca6g00356 149 CDD DnaJ 11 65 IPR001623 -
Seca6g00356 149 PRINTS DnaJ domain signature 31 46 IPR001623 -
Seca6g00356 149 PRINTS DnaJ domain signature 13 31 IPR001623 -
Seca6g00356 149 PRINTS DnaJ domain signature 48 68 IPR001623 -
Seca6g00356 149 ProSitePatterns Nt-dnaJ domain signature. 53 72 IPR018253 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g00356 Seca-Chr6 10350481 10354269 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g00356 1 73 C2H2 Transcription Factor Family AT1G74250 42.308 1.29e-12 62.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g00356 - - gmx:100305987 213.386
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca6g00356 6 10350481 10354269 Seca6g00356 6 10350481 10354269 ECH