Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g00353 ATGGAAGACAGGGGTAATAGGGTTAATGAGGGTGAAGGTGAAGATGTAAATAATTTGAAATCCCCTGATGAAGAAAATGCTTGTTCTGGTGAGTTTGTTCCTGATGTGTACAAAAGGATTTCTGAGTTAACTAATGACAACATTAGAATGCTTGAGTTTGATTCTGAACTGGATGCATATAATTTTTATTGTGAGTATGCGAAATTCAAAGGTTTTGCGGATAGAAAAGATGATGTTTATCGTGATCGTAATAGGTTTATTACCATGAGGAAATTGGTTTGTAACAGGCAGGGGGAAAGGAGTGAGAAGCATTTAAATAGGACAGATAGAATTAGGGAAGCTAAGGCCATTACTCATACCAATTGTCTTGCAAGGCTTCGACTGTATTTAGATAATAATAGTGGGAAGTGGAGGGTTGGAATGTTTGAGCCACAACACAATCATGAGCTAACTCCTGCAAATATGGTACATTTGATGCCTGCTTATCGTGGTTTGAGTGCTGCTGATAAGGCACAAGTAAATAGTCTTCACTTATATGGTGTTAGGACTTGTTATATAATGGGGCTAATAATGGGTCAGAAAGGTGGTTACTCAGATTTGGGATTTTGTAAGAAGGACTTGTACAATCACATTGACAATGAAAATAGGACCAAAATATAG 660 0.3727 MEDRGNRVNEGEGEDVNNLKSPDEENACSGEFVPDVYKRISELTNDNIRMLEFDSELDAYNFYCEYAKFKGFADRKDDVYRDRNRFITMRKLVCNRQGERSEKHLNRTDRIREAKAITHTNCLARLRLYLDNNSGKWRVGMFEPQHNHELTPANMVHLMPAYRGLSAADKAQVNSLHLYGVRTCYIMGLIMGQKGGYSDLGFCKKDLYNHIDNENRTKI. 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g00353 219 MobiDBLite consensus disorder prediction 1 21 - -
Seca6g00353 219 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 6 200 - -
Seca6g00353 219 Pfam FAR1 DNA-binding domain 61 151 IPR004330 -
Seca6g00353 219 MobiDBLite consensus disorder prediction 1 27 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g00353 Seca-Chr6 10238444 10239103 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca6g00353 FAR1 4.2e-19 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g00353 - - ccaj:109792835 207.608