Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g00335 ATGTCTCCTTTTGCGAGAAGTGTTCCCCTGCTTTGGTTGCTTAAAATATTGCTTTCAGCCAGCGATATTGCTCTTGGAAAAACACATGTGCAAGTCGTAAATCATTTGATGGGCAATTTGGACTTAACCTTTCACTGCAAATCTAAGGATGACGATCTTGGAGTCCAACTTCTCCATCCTAGTGAGTCTTGGGAATTTAGTTTTAACCCTGCCAAATTCTTTTGGACCACACAATTCTATTGTCTCTTTCAATGGCAAGATAATGTTGGAGTCCAACAGAAATGGTTTGATATATACATAGAAAATAGGGATTATTGCATAATTTGTACTTGGTTTATAAGCCAAGATAGACCATCAATGTCTCTTTTTGCGAGAAGTGTTCCCCTACTTTGGTTGCTTATAATATTGCTTTCAGCAAGCGATATTGCTCTTGGGAAAACACGTGTGCAGGTTGTAAATCATTTGACGGGCAATTTGGACTTAACCTTTCACTGCAAATCTAAGGATGACGATCTTGGAGTCCAACTTCTCCATCCTAGTGAGTCATGGGAATTTAGTTTTAACCCTGCCAAATTCTTTTGGACCACATAG 591 0.3909 MSPFARSVPLLWLLKILLSASDIALGKTHVQVVNHLMGNLDLTFHCKSKDDDLGVQLLHPSESWEFSFNPAKFFWTTQFYCLFQWQDNVGVQQKWFDIYIENRDYCIICTWFISQDRPSMSLFARSVPLLWLLIILLSASDIALGKTRVQVVNHLTGNLDLTFHCKSKDDDLGVQLLHPSESWEFSFNPAKFFWTT. 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g00335 196 Pfam Plant self-incompatibility protein S1 29 117 IPR010264 -
Seca6g00335 196 Pfam Plant self-incompatibility protein S1 148 192 IPR010264 -
Seca6g00335 196 PANTHER - 26 120 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g00335 Seca-Chr6 9264099 9272332 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g00335 146 195 Carbohydrate Esterase AT3G16970 44.000 8.93e-08 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g00335 - - lja:Lj3g3v2995840.1 107.071