Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g00333 ATGTCTCCTTTTGCTAGAAGTGTTCCCTTGCTTTGGTTGCTTATAATATTGCTTTCAGCCAGCGATATTGCTCTTGGAAAAACACATGTGCAGGTCGTAAATCATTTGACGGGCAATTTGGACTTAACCTTTCACTGCAAATCTAAGGATGACGATCTTGGAGTCCAACTTCTCCATCCTAGTGAGTCTTGGGAATTTAGTTTTAACCCTGCCAAATTCTTTTGGACCACACAATTTTATTGTCTCTTTCAATGGCAAGATAATGTTGGAGTCCAACAGAAATGGTTTGATATATATATAGAAAATAGGGATTATTGCAAAATTTGTACTTGGTTTATAAGCCAAGATAGACCATCAATGTCTCCTTTTGCGAAAAGTGTTCCCCTACTTTGGGTTTTTATAATATTGCTTTCAGCCAGCGATATTGCTCTTGGAAAAACACATGTGCAGGTTGTAAATCATTTGACGGGCAATTTGGACTTAACCTTTCACTGCAAATCTAAGGATGAAGATCTCGGAGTTCAACTTCTCCATCCTAGTGAGTCATGGGAATTTAGTTTTAACCCTGCCAAATTCTTTTGGACCACACAGTTCTATTGTCTCTTTCAATGGAAAGATAATGTTGGAGTCCAACAGAAATGGTTTGATATATACATAGAAAATAGGGATTATTGCATAATTTGTACTTGGTTTATAAGCCAAGATAGACCGTGTAAGCAGATTTCAGAAAAGGTGTCTGAATGCATTGCATGGAATAACTAA 762 0.3714 MSPFARSVPLLWLLIILLSASDIALGKTHVQVVNHLTGNLDLTFHCKSKDDDLGVQLLHPSESWEFSFNPAKFFWTTQFYCLFQWQDNVGVQQKWFDIYIENRDYCKICTWFISQDRPSMSPFAKSVPLLWVFIILLSASDIALGKTHVQVVNHLTGNLDLTFHCKSKDEDLGVQLLHPSESWEFSFNPAKFFWTTQFYCLFQWKDNVGVQQKWFDIYIENRDYCIICTWFISQDRPCKQISEKVSECIAWNN. 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g00333 253 PANTHER - 26 120 IPR010264 -
Seca6g00333 253 Pfam Plant self-incompatibility protein S1 148 251 IPR010264 -
Seca6g00333 253 Pfam Plant self-incompatibility protein S1 29 117 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g00333 Seca-Chr6 9137543 9139513 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g00333 146 253 Carbohydrate Esterase AT3G16970 37.931 6.31e-18 76.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g00333 - - pcin:129297219 127.487