Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g00330 ATGTCTCATTTTGCGAGAAGTGTTCCCCTGCTTTGGTTGCATATAATATTGCTTTCAGCCAGTGATATTGCTCTTGGAAAAGTACATGTGTGGGTCGTAAATCATTTGACGGGCAATTTGGACTTAACCTTTCATTGCAAGTCTAAGGATGATGACCTTGGAGTCCAACTTCTCCATCCTAGTGAGACGTGGGAATTTAGTTTTAACCCTTCCTTCTTTTGGACCACACAATTCTATTGTCTCTTTCAATGGTAA 255 0.4039 MSHFARSVPLLWLHIILLSASDIALGKVHVWVVNHLTGNLDLTFHCKSKDDDLGVQLLHPSETWEFSFNPSFFWTTQFYCLFQW. 85
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g00330 84 Pfam Plant self-incompatibility protein S1 29 84 IPR010264 -
Seca6g00330 84 PANTHER - 26 84 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g00330 Seca-Chr6 8833324 8833578 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g00330 27 84 Carbohydrate Esterase AT3G16970 46.552 1.22e-12 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g00330 - - lja:Lj3g3v2995840.1 80.8777