Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g00329 ATGTCTCCTTTTGCGAAAAGTGTTCCCCTGCTTTGGTTGCTTATAATATTGCTTCCAGCCAGTGATATTGCTCTTGGAAAAGTACATGTGCGGGTCGTAAATCATTTGACGGGCAATTTGGACTTAACCTTTCATTGCAAGTCTAAGGATGATGATCTTGGAGTCCAACTTCTCCATCCTAGTGAGACGTGGGAATTTAGTTTTAACCCTTCCTTCTTTTGGACCACACAATTCTATTGTCTCTTTCAATGGCAAGATAATGTTGGAGTCCAACAAAAATGGTTTGATATATACATACAAAATAGGGATGATTGCGTAATTTGTACTTGGTCTATAAGCCAAGATAAACCATGTAGGTACCTTTTCAGAAAACGAGTCTAA 381 0.3858 MSPFAKSVPLLWLLIILLPASDIALGKVHVRVVNHLTGNLDLTFHCKSKDDDLGVQLLHPSETWEFSFNPSFFWTTQFYCLFQWQDNVGVQQKWFDIYIQNRDDCVICTWSISQDKPCRYLFRKRV. 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g00329 126 PANTHER - 26 120 IPR010264 -
Seca6g00329 126 Pfam Plant self-incompatibility protein S1 29 120 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g00329 Seca-Chr6 8802802 8803182 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g00329 15 119 Carbohydrate Esterase AT3G16970 40.541 8.21e-22 82.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g00329 - - fve:101312887 107.842