Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g00305 ATGGATTTAAATAGTGAGGATTCTGCTGTTAACTTGGCTGATGATAGGGATGTAAGCTATAGTGACAGGGAAATTAGTGATAATAGTGGAAGTGAACGTGATATAACTACACAAGAGCGGATGGATACTGGGATAGAAAATATGTCAGAGGAACATCTAGAACAATTAATTTCAAAGGATCATGTAGAAGAATTAATTTCAGAGGATCATGTACAACAAAATATGCCAGAGCCAGAGGTTCGCAAGATAATAGATTTGTCTACTGATGACATATGGGGTTTGGAGTTTGGAAGTGAAGAAGATGCTTATAATTTCTATTTTTCATATGCCAGATGTCATGACTTTGCTATAAGGAGAGATGATGTATGTCGGGATGCGAAAGGCAATGTTACTATGCGTCAGTATTTATGCAGCAAACCTGGGTTGAGGGACAAAAAGCACTTTATGAAGGTAGATCATAAAAAAGAACACAGGCTTTTAACTCGTGTTAACTGTTTAGCTAAGTTACGAGTTAGGTATGATTATAAGAGTGGGAAATTTAAGGTGGTTTCATTTATTGAGGGTCACAACCATAAGTTAACTCCGGCAAAATTTGTTCCTTTAATTCCTTCATATCGTGGCTTGACCGAAGGGGATAAAGCTCAAGTGGATGCATTACATTCTTATGGGGTTAGGCCATGTCAAATAATGGGCTACCTATTGGATCAAAAGGGAGGTTATGCCAATGTAGGATTTTGCAAAAAGGATTTATACAACTACATAGATGAGGTCAAGCGTGGTAAGATTAAAGATGGTGATGCAATGGCTACATTAAGTTATTTTCAAGGAAAAGCAGACAATGAACCAGTGTTTTTCTCTAGGTTTCTATGTTTTGATGGTGGTAAATTGACCCACCTATTTTGGGCTGATGGAATTAGTCGGGCTGATTATCAATTTTTTGGAGATGTGGTTGCTTTTGATGCCACATACAAGAAGAACAAATACAGGTATCTGTTAGTTATATTTTCGGGTAAAAATCACCACTCTCAAACAATTATATTCGTTTGTGCTATAATTGTAGATGAGACCATTGAAACATATAAGTGGGTTCTAGAAATGTTTTTGAAAGCTATGTTTAACAAGCATCCAAGTGCAGTAGTGACTGATGGTGATGGTGCCATGAGGGAGGCCATTAGACAAGTATTTCCAAATGCATCTCACTGA 1203 0.3716 MDLNSEDSAVNLADDRDVSYSDREISDNSGSERDITTQERMDTGIENMSEEHLEQLISKDHVEELISEDHVQQNMPEPEVRKIIDLSTDDIWGLEFGSEEDAYNFYFSYARCHDFAIRRDDVCRDAKGNVTMRQYLCSKPGLRDKKHFMKVDHKKEHRLLTRVNCLAKLRVRYDYKSGKFKVVSFIEGHNHKLTPAKFVPLIPSYRGLTEGDKAQVDALHSYGVRPCQIMGYLLDQKGGYANVGFCKKDLYNYIDEVKRGKIKDGDAMATLSYFQGKADNEPVFFSRFLCFDGGKLTHLFWADGISRADYQFFGDVVAFDATYKKNKYRYLLVIFSGKNHHSQTIIFVCAIIVDETIETYKWVLEMFLKAMFNKHPSAVVTDGDGAMREAIRQVFPNASH. 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g00305 400 MobiDBLite consensus disorder prediction 9 39 - -
Seca6g00305 400 MobiDBLite consensus disorder prediction 1 39 - -
Seca6g00305 400 Pfam FAR1 DNA-binding domain 104 194 IPR004330 -
Seca6g00305 400 PANTHER OS01G0519700 PROTEIN 91 400 - -
Seca6g00305 400 Pfam MULE transposase domain 316 400 IPR018289 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g00305 Seca-Chr6 7873371 7874573 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca6g00305 FAR1 4.2e-16 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g00305 - - ccaj:109794460 443.351