Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g00289 ATGGAGGCAGAATTCGATGACCTGGAAATGTCATCTGTGCAGGCTGAAGATGAATTCTCTAGTAATGTGCAAGATGAGTTGCCAACGAGTGACTACTCTGAGGATGAAAGTAATAATACTGATAGTGGGGACTACTCTGAAGGAACTGATGAAGAAGAGGGAGGTGGTGAAGACCGTTCTGAACTTACAAGTATTGATTGTGTGGCTGATTTTGTTAATCTGAACTTTAGGATGATGAGTTCGGATGATTTTCTTAAGCATGACTTCTCGGATCGTGAGGTGGCATTTAAATTCTACAATTGGTATGCAAAAGTGAAAGGTTTTGCAGCACGAAAGGATAGGATTGGGAAAAAAGGTGATATGGTTGTTCGTCAAACTTTTGTTTTCTACAGGATGGGTAAACATGTAGCAAGACCTGAAGGATACAAAAAGGAACCAAAGCGCATACTGAGGTGTGGGTGTAAAGCACTTTGCAAGGTACGATTGAATTTAGAAACACAAAGATGGCAGGTGAAGGAGTTGATTGATGAACACAACCATCGTATGCTGGAAGAGAGGTTCCATGGCATGTTACCTAGGCATAGGAGGATGGATGTAAGTGATATAGTGAAAATGAATGATATGAGGGAAGCTGGGATTGGTACACCGAGTATCTATCAAGCATTTGCTAATCAATCGGGTGGATTTGATAGAGTAGGTTTCAGGGTCCGTGACATGTATAATCAGATAGTTAAGCAAAGGAATAGTAAAAAAAATTATGCAAATGAGGCAATGAGATACTTGGAAACCCTTCGCATTAGGGATTCGACAATGTTTTTTAGGCATGAAGTGGATGGTGATGGTCGTTTAGAACATGTATTTTGGTGTGACGGTATAAGCCAAGTTGACTATGATATTTTTGGTGATGTGGTTGCTTTTGATACGACCTATGGGAAAAATAAATACAAGTGGCCGTTGGTAGTTTTTACTGGTGTGAATCACCATAGGCAAACTACAATTTTTGCTTTTGCAGTGGTGTCAAATGAAACAGAAGAGACGTATGTTTGGATGCTCGAACAATTTCTTGAAGCAATGAAGGGGAAACACCCAAAAGCTGTAATTACGGATGGTGATAGAGCTATGAAAAATGCTATTGAGAGAGTGTTTCCACTTGCTACTCATAGGTTGTGTGCTTGGCACTTAATCCGAAATGCAACAAGCAACATAGGCAAAGAAGGCTTTAGTGCTCAGTTTGCAAGATGTATGCTAGGTGACTATGAGATTACCAGTTCAATGCAAGATGGAAAAAACTAA 1293 0.3998 MEAEFDDLEMSSVQAEDEFSSNVQDELPTSDYSEDESNNTDSGDYSEGTDEEEGGGEDRSELTSIDCVADFVNLNFRMMSSDDFLKHDFSDREVAFKFYNWYAKVKGFAARKDRIGKKGDMVVRQTFVFYRMGKHVARPEGYKKEPKRILRCGCKALCKVRLNLETQRWQVKELIDEHNHRMLEERFHGMLPRHRRMDVSDIVKMNDMREAGIGTPSIYQAFANQSGGFDRVGFRVRDMYNQIVKQRNSKKNYANEAMRYLETLRIRDSTMFFRHEVDGDGRLEHVFWCDGISQVDYDIFGDVVAFDTTYGKNKYKWPLVVFTGVNHHRQTTIFAFAVVSNETEETYVWMLEQFLEAMKGKHPKAVITDGDRAMKNAIERVFPLATHRLCAWHLIRNATSNIGKEGFSAQFARCMLGDYEITSSMQDGKN. 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g00289 430 MobiDBLite consensus disorder prediction 1 61 - -
Seca6g00289 430 Pfam MULE transposase domain 303 397 IPR018289 -
Seca6g00289 430 MobiDBLite consensus disorder prediction 14 28 - -
Seca6g00289 430 PANTHER OS01G0519700 PROTEIN 84 415 - -
Seca6g00289 430 Pfam FAR1 DNA-binding domain 97 183 IPR004330 -
Seca6g00289 430 MobiDBLite consensus disorder prediction 29 57 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g00289 Seca-Chr6 7115672 7117703 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca6g00289 MULE 2.3e-32 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g00289 - - tpra:123913749 399.053