Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g00270 ATGGAGTGTGAGAAGGAGATGGAAACAACTAAAAACACCCTCCCTCCTCCTCCTCCTCCTCCTCCCCCTCCTCCTCCTCCTCCTCAAACTAAAGTAAACAGAGTCCCAAGAAAAAGGAATACAGAGGAGCTTTCCATACTTTGTGGTATCCCTACATGCTCAGTCGTCTCTGGTCCAGGTGATACTGAGCCTAAAATATGGCCATCCTCTGAAGTGGCTAAACAACTACTACAGAGGCTTGAGGAAGTTCCAAAGGGTGTTAAGTCCAAAAAAGTGGTTACCCAATTGTCTTTTATGCGTGATAAGACAAAAAAGTTAGAAAATGAACTTTCCAGGCTCAAGGAGAGGAACAATGAGAAAGATATGTTAATTTTAATGCATCAAATCCATCATGATGGTAAGTCTTTATCTGATTTTGAACCTAGTGATTTGAAGTGTTTACTTGGTTATGTGGAGCAAAAACTGAACAAAGTTAGAATGAGAACCAAGCATTTTAAGCAGCTGTTGCCTCCTAATCCTCCTCCTACACCACCAGTTTCTTGTCCTCAAGAGAATGAGGTCCTAGAGAAACAATCATCCTTAGATTTGGTGAAAGAGGCTAATCAGTTGAATGATGGTTTTTATAATGATAATAATATAGGTAGTAGCAGCATGGGGCTACAACCACCACATGCAAATCTTAGTGATGTTGATATGGTGTTTCCCCAAGAGAATTTTGGAGGTTTCAATAATGTAAGTGATTTAGGGGTGTTTCCTCCAAGCAATTTTCGAGATCTCATTGGTGAAAGTGACCTAGGGTCAGAGGTGTTCTCTCTTAGTTATTTGGGAGGCCTCATTAGTGAGAGTGACTCAAGGTTAGGGGCATTTCATGTAGAGAATTTTGGAGGTCTCATTGGTGAAAGTGATCACTTGGGGTCAGAGGTGTGGCCACCTCAAGACAATTTTAGAGGTCTCAATGGTGAAAGTGATTTAGGAATGTTGCTTGAATATAATTTTGAAGGTCTCAATGGTGAAAGGGGTGATAGTTCACAGGTGTGGCCTGAAGGCAATTTTGGAGATCTAAATGATGGAAGTGATCTTTTAGAGATGTATAACTTTGAAGGTATCAATGGTGAAAGTGGTGATAGTTCACAGGTGTTGCCTGAAGGCAATTTTGGAGATCTCAATGATGGAAGTGATCTCTTAAAGATATTGTTTGAAGAGCAGCATAATGAAAATCAAGGAGGGTTCATTAACAACTCTGGAGCCAACACTCATGAAGCTGCCATAGGGAGATTCGATGCAAACTTTGTTGGCAATAACAATGGAAATAACTTGAATTTCGGATTGCCTACTCATGGAATTTTTGCTAGTAGCGGTGAATTTGGAAGTGATACTCAAATGCCTACATCATTTGGAGGAAATTTTCCTTGA 1413 0.4041 MECEKEMETTKNTLPPPPPPPPPPPPPPQTKVNRVPRKRNTEELSILCGIPTCSVVSGPGDTEPKIWPSSEVAKQLLQRLEEVPKGVKSKKVVTQLSFMRDKTKKLENELSRLKERNNEKDMLILMHQIHHDGKSLSDFEPSDLKCLLGYVEQKLNKVRMRTKHFKQLLPPNPPPTPPVSCPQENEVLEKQSSLDLVKEANQLNDGFYNDNNIGSSSMGLQPPHANLSDVDMVFPQENFGGFNNVSDLGVFPPSNFRDLIGESDLGSEVFSLSYLGGLISESDSRLGAFHVENFGGLIGESDHLGSEVWPPQDNFRGLNGESDLGMLLEYNFEGLNGERGDSSQVWPEGNFGDLNDGSDLLEMYNFEGINGESGDSSQVLPEGNFGDLNDGSDLLKILFEEQHNENQGGFINNSGANTHEAAIGRFDANFVGNNNGNNLNFGLPTHGIFASSGEFGSDTQMPTSFGGNFP. 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g00270 470 Coils Coil 96 123 - -
Seca6g00270 470 MobiDBLite consensus disorder prediction 12 32 - -
Seca6g00270 470 MobiDBLite consensus disorder prediction 1 39 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g00270 Seca-Chr6 6772049 6773599 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g00270 42 179 MADS-box Gene Family AT5G26630 29.655 2.32e-15 73.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g00270 - - gmx:106798339 213.386