Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g00260 ATGGCTGCCCAGCAAGATCAACAAAATCTTGCAACTGTAGATGTCCACACTGCCAAAGATCTGCTCAATTCATCTGGTTACCGTTATCTCGATGTCAGGTCAGTTGAGGAATTCAACAAAAGCCATGTTGAGAATGCTCATAATGTCCCCTATATGTTCATCACAGAAGCAGGACGAGTGAAAAATCCTGATTTTGTTAACCAGGTTGCAGCAATATGCAAAAATGAGGATCATTTAATTGTGGCTTGCAATAGTGGAGGAAGATCAAGCCGAGCCTGCGTTGATCTAATTGATTCAGGATATAAGAATGTTGTTAACATGGGAGGAGGCTACTCTGCGTGGGTGGACGCTGGATTTGCCGGGAACAAGCCAGCAGAAGAGCTCAAAACAAGTTGCAAGTTTCGTCCATAA 411 0.4355 MAAQQDQQNLATVDVHTAKDLLNSSGYRYLDVRSVEEFNKSHVENAHNVPYMFITEAGRVKNPDFVNQVAAICKNEDHLIVACNSGGRSSRACVDLIDSGYKNVVNMGGGYSAWVDAGFAGNKPAEELKTSCKFRP. 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g00260 136 Gene3D - 1 120 IPR036873 -
Seca6g00260 136 SMART rhod_4 13 120 IPR001763 -
Seca6g00260 136 Pfam Rhodanese-like domain 17 116 IPR001763 -
Seca6g00260 136 CDD RHOD 17 115 - -
Seca6g00260 136 ProSiteProfiles Rhodanese domain profile. 23 123 IPR001763 -
Seca6g00260 136 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 9 119 IPR036873 -
Seca6g00260 136 PANTHER THIOSULFATE SULFURTRANSFERASE 18 3 125 IPR044684 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g00260 Seca-Chr6 6386994 6388558 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g00260 8 127 Sulfurtransferasese or Rhodanese AT5G66170 47.541 2.23e-35 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g00260 K22547 - gmx:100794624 249.98