Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g00184 ATGGCAATAGCGATAACCCAATGTTCAGAAAAGCTAGGCTACCTCATATTTCAATTAGGCAAAAATTTCGTCATGTTTATGGCGATGGTGGTTGCTTGCAACGGTTTACATTTCCTACTAAGGCCTTATTCACAGCCTCGCGTTACATCTGACATACTTGTAGGACTAATTATGGGCAATGCACCTTTTTTACGTGACCTATATGAGGAATTCAATTTAACCTTTGAATTTGTAATAGATTTTGGCATGATGTGTTACATGTTTGCATTGGGTATAGAAATGGATCCTTATGTACTATTCAAAACACCAAGCAGGGAAGCTCAAGTTGCATATGCAGGAGTAATCACCACATTTATCTTAGCATGTACCATAACCCCACTTCTACATTACTTCTCAAGCCTATATGAAATAGAATTCACCCTCTCTTTTTCAACACTTCTCTCAAGCACAGCATCACCCGTTCTAACTCGCCTAATAACTAACATGAAAATAGGCAAATCAGATATTGGAAGGCTTGTGATATCAGCAGGGATGTACTCAGATTTCCTCTGCTCTTTGTTTCTATCAATTGGCTACTTATCCATGCCAATGGATACAATTTGCACTGATTCTGAAGAAGAGAAGCGTCTTAAGAAGGTTATTACAATGGGGTGTGCAGTGGTTGCGCAGACACTGTTCACAGCATTGGTATCACCAGTTTTTATGAACTGGGTTAACAATGAAAACCCTGAAGGGAAACCCATGAAAGGTTCACACCTGGTACTGTCAATTGCCTTCATGGTCATGATTTGTGCCTCCTCAACTCTATACGATTATAGTCCAATTCTAAGTGCGTTTATGACAGGGTTGTGTTTTCCCCGGGAGGGCAGAGTTTCCAAATGGGTTATCGGCAAAATCAACTATTTGTTGACCACCATCTTCTTTCCCATCTTTTTCTTGTGGATGGGGTATGCTGCTGATTTCAGGGAGTTTAAGCCTGGAGATGCAGAAACATGGGCAAGATTACTTGTACCCATGACCATAACAATATTAGGTAAAGTTGCTGGAACTGTTGTTTCTGGGTCAATGCTTGGCTTTAACTGGCCTGAATCAGTTGCAATCGGATTGCTTCTCACCACCAAGGGTCATTTTCATATCTACATGGCTATCAAAGTGGCAAGTATTCTCCTCTCCTCCTTCACTATCTCAAATTCCTATCTATGTGTCATGTCCAAAATCGGTTGTGGCGCCTCTATTTCCTCTGGCATTGCATTAGTAATTGTAACATTTTTCACAGTGGTGCCTGCCCCCATAGTTGTGGCAAATATCATCAAACGTGCTAGGAAAAGGGCACCTACACATCGAATGGCCCTCCAATTACTTGATCCATCAAGTGAGTTAAGGATACTCTTGTGCCTTCATGGACCTGATAACGTTCCTGCTTCCATCAACCTCATGGAGATCTCAAGAGGGATAGTACACCCTGGCATTCTGTTATATGTTGCGGAAATGATTGAACTAACTGATGAATTAGCACCCTTAATAGAGAAGGGTGAAGGACCAGAAACAACAACTGTGAAAGACAATGCAGTTGTGGAGATGAGAGAAAAAATAACCAGCTCATTTCAAACCTATTTAGATGCTGATGGTGATGGTATTACGCTCAAAAGAGCTTTGGCAGTGTCAACAATCACTAACATGGCACAAGACATTTGTAGTTTAGCAGAGGATTTGACAACTGCCCTCATCATACTACCATTCCACAGGACCCAGCGTCAAGATGGAAAATTGGATAGTGGCAATCAAGGGTTCAGATATGTCAACAGAAAGTTATTGAGGAGTGCTCCTTGTTCCGTGGGGATTCTAGTGAACAGAGGCTTAGGGTCCATTGGAAAGATATCAAGAACTGAAGTATCACTCAATGTGGCAACAGTATTCATTGGAGGAAAAGATGATAGAGAAGCACTTGCCTATGCCGGTCGAATAGCACGACATCCAGGGGTGAAAATCACAGTTATAAGATTCCTGGTAGATACAAGTGCAGAATCCTCAAGAATAGCAGCTTACAGGGTAACCCTTCCAGAGCAGGAGGAGGAGATGGGGCTGGATGATGAATGCTTTGCACAATTCTATGAGAAGCATATAGCTGGGGGTCGTATTTCCTATACAGAGAAGCATCTTACTAATGCAGCTGAGACATTCACCACTCTTAGATCATTTGAAGGAACATACTCACTGGTCATTGTAGGAAGAGAAGGTGGAGTGAATTCTATATTGACAAAGGGGATGAATGACTGGCAACAGTGTCCAGAACTGGGACCAATTGGGGATGTTCTTTCAGGACCAGACTTTGCAAAGACGGTCTCTGTGTTAATAATCCAACAACACAGAATTAAAGGTGAACTAGATGGACTTGATGATGACTTCTCCATCATGTAG 2418 0.4189 MAIAITQCSEKLGYLIFQLGKNFVMFMAMVVACNGLHFLLRPYSQPRVTSDILVGLIMGNAPFLRDLYEEFNLTFEFVIDFGMMCYMFALGIEMDPYVLFKTPSREAQVAYAGVITTFILACTITPLLHYFSSLYEIEFTLSFSTLLSSTASPVLTRLITNMKIGKSDIGRLVISAGMYSDFLCSLFLSIGYLSMPMDTICTDSEEEKRLKKVITMGCAVVAQTLFTALVSPVFMNWVNNENPEGKPMKGSHLVLSIAFMVMICASSTLYDYSPILSAFMTGLCFPREGRVSKWVIGKINYLLTTIFFPIFFLWMGYAADFREFKPGDAETWARLLVPMTITILGKVAGTVVSGSMLGFNWPESVAIGLLLTTKGHFHIYMAIKVASILLSSFTISNSYLCVMSKIGCGASISSGIALVIVTFFTVVPAPIVVANIIKRARKRAPTHRMALQLLDPSSELRILLCLHGPDNVPASINLMEISRGIVHPGILLYVAEMIELTDELAPLIEKGEGPETTTVKDNAVVEMREKITSSFQTYLDADGDGITLKRALAVSTITNMAQDICSLAEDLTTALIILPFHRTQRQDGKLDSGNQGFRYVNRKLLRSAPCSVGILVNRGLGSIGKISRTEVSLNVATVFIGGKDDREALAYAGRIARHPGVKITVIRFLVDTSAESSRIAAYRVTLPEQEEEMGLDDECFAQFYEKHIAGGRISYTEKHLTNAAETFTTLRSFEGTYSLVIVGREGGVNSILTKGMNDWQQCPELGPIGDVLSGPDFAKTVSVLIIQQHRIKGELDGLDDDFSIM. 806
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g00184 805 PANTHER CATION/H + ANTIPORTER 27 790 - -
Seca6g00184 805 Pfam Sodium/hydrogen exchanger family 28 427 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Seca6g00184 805 Gene3D - 21 448 IPR038770 -
Seca6g00184 805 FunFam Cation/H(+) antiporter 28 20 446 - -
Seca6g00184 805 Gene3D - 488 758 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g00184 Seca-Chr6 4545010 4548077 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g00184 24 805 Antiporter Super Family AT3G52080 48.744 0.0 789
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g00184 K26731 - gmx:100815945 1188.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca6g00184 6 4545010 4548077 Seca6g00184 6 4545010 4548077 ECH