Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g00153 ATGACATCATTGTCAGTTGATCAAAATGATGAACTTTGGCTTGGTTCCACGGAGGACGTTCCTTTGCCACAATCATTTGAGATAAATGAATGGGTGCCAGATTGCAATGAAGAATTAAAGCCTAAGATAGGGCATATATTTGATACATTAGAAGATGAAGGTTACAAACCAAATAAAGCAGAAAGTGTGGAACAAAGTAAATCAACAACTAAGACTAGAAGAAAGAGTCTTACAAGAGAAGGATGTAATGCAAAGGTTGCTTTCAAATTGTTAGAGGGAGGTAAGTATGAGCTTGCTCGATTTCATGAGAGTCATACACATGCACTTGCCAAACCTAGGAAAAGACAGTTTCTAAGATCAGTAAGAAAATTGAATCCTGTTCATAAGAGTTTACTGTATGCATATAATAGAGCAAACATTGGGCCTTCAAAGACATACCAGTTATTGAAAGAACAAGTTAAAGGTTATGAAAATGTAGGGTTCACAAAAAGGGATCTCCATAATTGTTTGAGAGATTTGAAAACCTTGATTAAAGATTCAGATGCATATGCATTTGTTGAAAAAAGGGAAAGCAGGAAGTGA 582 0.3557 MTSLSVDQNDELWLGSTEDVPLPQSFEINEWVPDCNEELKPKIGHIFDTLEDEGYKPNKAESVEQSKSTTKTRRKSLTREGCNAKVAFKLLEGGKYELARFHESHTHALAKPRKRQFLRSVRKLNPVHKSLLYAYNRANIGPSKTYQLLKEQVKGYENVGFTKRDLHNCLRDLKTLIKDSDAYAFVEKRESRK. 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g00153 193 PANTHER OS01G0519700 PROTEIN 53 185 - -
Seca6g00153 193 MobiDBLite consensus disorder prediction 57 76 - -
Seca6g00153 193 Pfam FAR1 DNA-binding domain 62 110 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g00153 Seca-Chr6 3921103 3921912 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca6g00153 FAR1 1.9e-06 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g00153 - - mtr:112422154 192.971