LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Seca6g00126	ATGGTGGAAATCTGCACTGTTTTATCCTTATTCAACATTCTGGAACAACAAAAGAAGTTGTCTGCCCTTGAGATGGAACTAGCTGCAGCTAAACAGGAAGGTTTAGTTCCGAAGCATTTGTTAGGAAATGATCAGAAGCATCCTACAAAGAAGGCAGGTGTGAGAGAACAAGTTACTACTATGGAGGACAATACTAACAACACCAAATCATCATTCATAACTCATCAGAGTTGGCTGCTATTGACTCTCTGCAAGCATCTTTCATCATATCCTATAGATAATAATCCAGATTTTACTGCCAGGCCATCATTTTTTGGAAAGCTTGAGCCAATTACTAAGTTGATGGAAGTGCCTGACGGGAAGCAGTCATTGGACCGGTGCCTGGAAATTGAACTGGCATTGGCTCCTCTGCCTATTCAGGGATGCAGTCTTCGGAAAACAGAGTATATTGTTTGGGCTGTTATTTTTACTGGACATGAAACAGAGGTATACTGTTATGAAATTACATCTGATGTTAATAACAATGTGCAGAATAGTGTGAAACTTAAGCTACAATTATTTCCAATTGATGAACCTACTCAAAGAACCTTAAAAATGATTCAAAATATGGCTCATGACCTTAAGGAATTACTACAGCTGTGTGTTAATGGATTTAAGGCCATTGCTTCTGTTATTAAGGCTACTGGTGTGTGA	693	0.3882	MVEICTVLSLFNILEQQKKLSALEMELAAAKQEGLVPKHLLGNDQKHPTKKAGVREQVTTMEDNTNNTKSSFITHQSWLLLTLCKHLSSYPIDNNPDFTARPSFFGKLEPITKLMEVPDGKQSLDRCLEIELALAPLPIQGCSLRKTEYIVWAVIFTGHETEVYCYEITSDVNNNVQNSVKLKLQLFPIDEPTQRTLKMIQNMAHDLKELLQLCVNGFKAIASVIKATGV.	231

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Seca6g00126	230	Coils	Coil	13	33	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Seca6g00126	Seca-Chr6	3389030	3395446	Dispersed/Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Seca6g00126	132	163	Primary Pumps ATPases	AT1G59820	67.647	9.91e-07	47.4

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Seca6g00126	K20854		K14802	gmx:100802753	61.6178