Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g00105 ATGGATGTGCAGGCTCTCACAATTCTAATCTTCATCCTTCTATCAATTGCTGCAGCTTGCGACGACAACAGTACTAATCATCATCCCCAAAACAGTACCACTCAAAGCTATGTAAACTACATCAAAAACGCATGTCGTTCAACCACATACCCTTCCATATGCTACAAATCTCTGTATCCCTATGCATTGAAAATTGAAGGTGATCCCCTGAAGCTCTGCAATACTTCTCTGTCTCTCGCCTTAAAGGCAGCTTATAGAGCATCGAGGACGATATCAAAGCTTTTGGAGGACAACAATTTGGCACACACAACAGAACTAGTGGTTGAAGATTGCTTTGACAATCTCAAGGAGTCCATTGGGGAACTGAGGGATTCTCTTGTTGCAATGCAACATTTGGACAGTGATAGAGAGTTTCAAATGAGCAACATCAAGACTTGGGTGAGTGCTGCTATCACTGATGATCAAACATGCTCTGATGGGTTTGACAATGTTATGGATGTCAATGTGAGGGATAAGATTAGAAAGAATGTTTTCAAAGTGGGAAAGATGACTAGCAATGCTTTGTATTTCATTAACAATCTCACCTACTAA 591 0.4078 MDVQALTILIFILLSIAAACDDNSTNHHPQNSTTQSYVNYIKNACRSTTYPSICYKSLYPYALKIEGDPLKLCNTSLSLALKAAYRASRTISKLLEDNNLAHTTELVVEDCFDNLKESIGELRDSLVAMQHLDSDREFQMSNIKTWVSAAITDDQTCSDGFDNVMDVNVRDKIRKNVFKVGKMTSNALYFINNLTY. 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g00105 196 PANTHER PECTINESTERASE INHIBITOR-LIKE 8 188 - -
Seca6g00105 196 FunFam Pectinesterase 37 195 - -
Seca6g00105 196 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 39 194 IPR035513 -
Seca6g00105 196 Pfam Plant invertase/pectin methylesterase inhibitor 40 188 IPR006501 GO:0004857
Seca6g00105 196 CDD PMEI-like_3 44 195 - -
Seca6g00105 196 Gene3D Invertase/pectin methylesterase inhibitor family protein 37 195 IPR035513 -
Seca6g00105 196 SMART PMEI_2 36 190 IPR006501 GO:0004857
Seca6g00105 196 NCBIfam pectinesterase inhibitor domain 11 195 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g00105 Seca-Chr6 2759103 2759693 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g00105 14 195 Carbohydrate Esterase AT1G53830 28.191 1.49e-12 63.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g00105 - - gmx:100527443 223.016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca6g00105 6 2759103 2759693 Seca6g00105 6 2759103 2759693 ECH