Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g00104 ATGGCCCTGCACACTCTTTTTGGAAGTTCAATGTCTTGCCATAGTCTCTTCAGAGTACTTCTTTCCCTTCTTTTCATCTCAACCCTTCTTCACTCAGCATCTGCATGCAACTCCACAAACACCACCAATTCCCAGCTCAAAGCCTATAAAAAGTTTATATTCAATCAGTGCAATTCAACCACTTACCCAAAAGTTTGCTACAAGTCTCTGACCCCTTATGCATCAAAAATCAAAACAAACCGTTCAACACTCACCAGAACCTCTGTTCTTCTGGCTCTAAAAGCAGCCAGAAGTTCATCTAAGACATTAACAAAGCTATCCAGTTCCAAGAACCTGACACATCCAGAAACATTGGTCATTGCTGACTGCAGGGAGAATATTGATGACACTGTGGATCTACTTGAGCAATCTGTTGATGGCATTTTACGTTTGAATGGCACCACTACTGATGATGAGAAATTTCAATGGGATAACATAAAGACATGGATGAGCGCTGCCATAACAGATGAGACTACATGCACGGATGAGTTTGATGAAATGGAAGTGGGGGCTTCCCTGCAGAAGAAGATCAAAACCAGTGTTGATAATCTTGCTTGGCTGACTAGCAATGCCCTGGCTTTGGTAAACAGGCTTACTTTCTAA 642 0.4206 MALHTLFGSSMSCHSLFRVLLSLLFISTLLHSASACNSTNTTNSQLKAYKKFIFNQCNSTTYPKVCYKSLTPYASKIKTNRSTLTRTSVLLALKAARSSSKTLTKLSSSKNLTHPETLVIADCRENIDDTVDLLEQSVDGILRLNGTTTDDEKFQWDNIKTWMSAAITDETTCTDEFDEMEVGASLQKKIKTSVDNLAWLTSNALALVNRLTF. 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g00104 213 CDD PMEI-like_3 57 212 - -
Seca6g00104 213 PANTHER PECTINESTERASE INHIBITOR-LIKE 22 207 - -
Seca6g00104 213 SMART PMEI_2 48 207 IPR006501 GO:0004857
Seca6g00104 213 NCBIfam pectinesterase inhibitor domain 22 211 IPR006501 GO:0004857
Seca6g00104 213 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 51 211 IPR035513 -
Seca6g00104 213 Gene3D Invertase/pectin methylesterase inhibitor family protein 46 212 IPR035513 -
Seca6g00104 213 Pfam Plant invertase/pectin methylesterase inhibitor 52 207 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g00104 Seca-Chr6 2726649 2727290 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g00104 57 212 Carbohydrate Esterase AT1G53830 28.662 7.84e-14 67.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g00104 - - cam:101501841 260.766