Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g00082 ATGCCGGATGTTCAGACACTTGTTAATGATTTTGTGAATCAGCTTAAGAAACGTAAAATTGAAGGTTCTCAGGCAACAGCAAAACAGACGGCGGAGTTGCTCCGGTCTGTGATTTCACAGCAGCGGGTGCCACAGACAAACCAGGCTACAGCACTGATTAATGCAGTAAGGGCTGTGGGAGAGAAGCTTATTGCTGCTAATCCTGTTGAGCTAGCTGTGGGAAACATTGTGAGGCGTGTTTTGCACATTATAAGAGAGGAGGATCTTTCCCTTGCCACAGCTGCTATAGCTGGTTTGGGGCTATCAGCTACAAGTGATGATGAAGATGATGTGGAGCGAGATGATCATCCTGTTTTATCTGCTGCTGCTGTTGCAGCTGCTGCAAGAAGCACCTTGCGCCCGCCATCATTGCAAACTCTTCTAGAGGATACACCCAATTCGGCTGCTGTTCCGCTCACATCTTCCTCAGGGGGTGAATCTGAAGGGAAAAGTAGATTTTTGTTTTCCTTTGCTACAGCTGTTGACAAAGGTCCAAGAGGTCGGAAGTTGAAGCACGATGTCATTGAAGCAGTTAATGAACTTATTCAAGACATATCCACTTGCTATGAACAAATAGCTGAGCAAGCAGTAGAGCACATTCATCAAAATGAGGTAATATTAACACTAGGCAGTTCAAAGACAGTGTTGGAATTTCTTTATGCTGCGAAGGAAAAAAAGAGATCATTTAAGGTCTTTGTTGCTGAAGGTGCCCCAAGATATCAGGGACATCTCCTTGCAAAAGAATTGGCTGCTAGAGGCTTACAGACCACAGTAATTACTGATTCTGCAGTTTTTGCGATGATTTCCCGAGTTATAGTTGGATCTCATGCTGTCATGGCTAATGGTGGAGTTATTGCCCCAGTTGGGTTAAATATGGTTGCACTTGCAGCTCAAAGGCACGCTGTTCCTTTTGTTGTACTTGCAGGGAGTCACAAGTTGTGCCCTTTGTATCCTCACAATCCTGAAGTCCTACTGAATGAGCTGAGATCTCCATCTGAGCTACTTGACTTTGGGGAATTCTCAGATTGCATGGATTCTGCAAGTGGTGCTGGAACTCTTCACGTCATCAATCCAACATTTGATTATGTGCCACCAAAACTTGTTAGTCTCTTTATTACTGACACAGGAGGGCATAACCCATCATATATGTACCGTCTCATAGCTGATTATTATTCAGCTGATGATTTGGTGGTGAAACGAAGACCAGCTACAGGCAGTTGA 1260 0.4437 MPDVQTLVNDFVNQLKKRKIEGSQATAKQTAELLRSVISQQRVPQTNQATALINAVRAVGEKLIAANPVELAVGNIVRRVLHIIREEDLSLATAAIAGLGLSATSDDEDDVERDDHPVLSAAAVAAAARSTLRPPSLQTLLEDTPNSAAVPLTSSSGGESEGKSRFLFSFATAVDKGPRGRKLKHDVIEAVNELIQDISTCYEQIAEQAVEHIHQNEVILTLGSSKTVLEFLYAAKEKKRSFKVFVAEGAPRYQGHLLAKELAARGLQTTVITDSAVFAMISRVIVGSHAVMANGGVIAPVGLNMVALAAQRHAVPFVVLAGSHKLCPLYPHNPEVLLNELRSPSELLDFGEFSDCMDSASGAGTLHVINPTFDYVPPKLVSLFITDTGGHNPSYMYRLIADYYSADDLVVKRRPATGS. 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g00082 419 FunFam translation initiation factor eIF-2B subunit beta 201 404 - -
Seca6g00082 419 SUPERFAMILY NagB/RpiA/CoA transferase-like 5 408 IPR037171 -
Seca6g00082 419 Pfam Initiation factor 2 subunit family 19 393 IPR000649 GO:0044237
Seca6g00082 419 PANTHER TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT BETA 2 410 - -
Seca6g00082 419 MobiDBLite consensus disorder prediction 138 161 - -
Seca6g00082 419 Gene3D - 201 403 IPR042529 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g00082 Seca-Chr6 1949377 1956501 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g00082 1 411 Eukaryotic Initiation Factors Gene Family AT3G07300 78.606 0.0 619
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g00082 K03754 - gmx:100778545 724.546