Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g00064 ATGGCTCATTTACTGGCCAGTACTTCACATTCACATAAACCTATATGTCCAAACTTGGCGTATGGTGTTAGAACAGGAACAGGAACAGGACCCAGAAATACATGTTACAGAAAAAGCAGTTGTTTGGTGTTGCAATTGCAATGCAGCAGCAGCAGTTCACAATTGTCTCGTACTGCTGCTGATCAGTTGCAGGTTGAGAATGGTAGTGGAAAACAGCTTAAGCAACAGTTTGAGTATTTGGTGTGTGAATATGGTTGGAGGGTAAGGAGACTCATTGAGAATAATGCAGATGAGATAATGATGGCATCTCAAGTTCAAGCTGAAGCATTCCATGTTCCTGTCGCTCTTTTCAACGACCTGTTCTTCCAATTCTTTCAGGCGGAAGTGCTTTCCGGGCTCCTTTACAAGCTTAAAAACTCACCTCCCAATAGGTATGCTTGCTTGGTGGCTGAGTTAGCAAAAAATGATCCAGATTCACCAAAACAACTTGTAGGTGTCATAGATGCCACTGTCATGAGAGACAAAGATGTGCTTCAACATCTCCCTGCTGAAGCACAAGAGTACCTTTACATATCAGGAATAGCAGTCTCCAAAACTTTCAGGAGGAGGAAAATAGCTACTGCTTTGTTGAAAGCCTGTGAAATGCTTTCCATTTTGTGGGGTTTTGAGTTTCTTGCACTTCGAGCTTATGAAGACGATCTGGGTGCTCGAAAATTGTATGCAAATGCTGGGTACCAAGTTGTGTCTAGAGATCCACCATGGACAAGTAATTGGATTGGAAGGAAATGCCGTGTTCTTATGATCAAAAGAACTAATTTGCCTACATAG 828 0.4227 MAHLLASTSHSHKPICPNLAYGVRTGTGTGPRNTCYRKSSCLVLQLQCSSSSSQLSRTAADQLQVENGSGKQLKQQFEYLVCEYGWRVRRLIENNADEIMMASQVQAEAFHVPVALFNDLFFQFFQAEVLSGLLYKLKNSPPNRYACLVAELAKNDPDSPKQLVGVIDATVMRDKDVLQHLPAEAQEYLYISGIAVSKTFRRRKIATALLKACEMLSILWGFEFLALRAYEDDLGARKLYANAGYQVVSRDPPWTSNWIGRKCRVLMIKRTNLPT. 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g00064 275 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 108 270 IPR016181 -
Seca6g00064 275 CDD NAT_SF 162 227 - -
Seca6g00064 275 Pfam Acetyltransferase (GNAT) family 140 245 IPR000182 GO:0016747
Seca6g00064 275 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 100 272 IPR000182 GO:0016747
Seca6g00064 275 PANTHER N-ALPHA-ACETYLTRANSFERASE 83 271 - -
Seca6g00064 275 FunFam Histone acetyltransferase HPA2 and related acetyltransferases 92 272 - -
Seca6g00064 275 Gene3D - 84 271 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g00064 Seca-Chr6 1601703 1603482 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Seca6g00064 Acetyltransf_1 1.4e-09 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g00064 - - gmx:100808330 397.897