Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca5g05415 ATGGGGAAGAATGAGGAGCAACAATATGTGCAAGATGAAGAGCAGAGGCAGAGCGATTGGGTTGAGGCTCATCGATGCTGTTCGGTGGTTCTGGGAGCATTCAGTTTCAAGTGCCTCTTCATTCTCTTGTTCAGTCTGTCCGCTTTGCTATCTGGAATCTTCTGGATTCTTCCTAAATTCACAATCAAATATAGCTTTGATGCAAAAGATGTAATTAAGCAGAGTGCTACTGTACAGACATCCTTCAGGCTGGAAAAACCAGTTTCACAGGTTATTCCTTACATTGAAAGATTAGAATATGATATATATGGTGAAATAGCTCTGCCAAATACAAAGGTCGCTATCCTATCTATGCATCAAAGTGTTACACCTAACTGGACTGACGTGGTGTTTGGAGTTCTCTCTGATCCAATGAACGTTTCAATAAATCCAGTGTCCTTGAGTGTGCTGAGGTCATCATTAATTGAACTGTTCCTCCAGGAATCCAACCTGACTTTGACAACGCCAATATTTGGGAATGCATCGAAATTTGAGATCTTGAAGTTTCCTGGAGGGGTAACTGTAATACCAGTGCAGTCTGCTTCTATCTGGCAGATACCCCAGAGTCTGTTTAATTTTACTCTTAACAATTCAATATCTGAACTGCTGGATTATTTTGATGACTTCAAGGATGAGTTGAAGTTCGGATTGCATCTGAAGTCTGATGAGAATGTGTATGTGCAAATAACAAATGCAAATGGCTCAACTTTAGCTCCTCCAGTAGTAGTGCAGGCTTCAGTCCTGCCAGGCTTTGGGAGCCTCTTGCCCCAGAGATTGAAACAATTAGCTCAAACAATAACAGGCTCTGCTGGAAGAAATCTTGGCCTTAATAACATAGTTTTCGGCAAAGTCAAAGAAATCAGGTTATCATCTTTTTTAAAGGATACACTACATGCTTACCCACCTTCTCCTGCTCCTGCTCCTGCTCCTTCCCCACAGTTAATTGATCACTCTGAACCACCAATTTCACCATATCATGCACCTTCTTACTCTCCAATATCCCCGGCAATCGCTGAGAAACCTCCTTGTTTTGACTGTGAAATATCGTCACCTGCACCTTCTACTGGGCCTGAGCATCCTCCAGATCCATGTCCATACAGTGGCTCTGTATATCATCCAATCCCTTCACCAAAATCTTATTCTAAACCATCGTTCCGCCCAGCTTATTCACCTGCTGCTGCCCCTACCTCCCATTCTGCCAGCCACTCAACTGAGGTAGCTCCAGATCTGTCACATGTAGCTGAGGCGTCCCATGGATCCAAGCTTCGCCAGGGTGAAGGGAGATCTAAAATATTGGTGTCTCAATCACTTGCTCCATCTTCTCTATCTTCAGCAGGTGGTGATTTCCATAGTGAAATCTTTCTAATGGCATTTTGTATGCTATTAATTTCTTTTGTTTTTCTCAATGATATTACATTTTGA 1461 0.4257 MGKNEEQQYVQDEEQRQSDWVEAHRCCSVVLGAFSFKCLFILLFSLSALLSGIFWILPKFTIKYSFDAKDVIKQSATVQTSFRLEKPVSQVIPYIERLEYDIYGEIALPNTKVAILSMHQSVTPNWTDVVFGVLSDPMNVSINPVSLSVLRSSLIELFLQESNLTLTTPIFGNASKFEILKFPGGVTVIPVQSASIWQIPQSLFNFTLNNSISELLDYFDDFKDELKFGLHLKSDENVYVQITNANGSTLAPPVVVQASVLPGFGSLLPQRLKQLAQTITGSAGRNLGLNNIVFGKVKEIRLSSFLKDTLHAYPPSPAPAPAPSPQLIDHSEPPISPYHAPSYSPISPAIAEKPPCFDCEISSPAPSTGPEHPPDPCPYSGSVYHPIPSPKSYSKPSFRPAYSPAAAPTSHSASHSTEVAPDLSHVAEASHGSKLRQGEGRSKILVSQSLAPSSLSSAGGDFHSEIFLMAFCMLLISFVFLNDITF. 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca5g05415 486 MobiDBLite consensus disorder prediction 361 381 - -
Seca5g05415 486 MobiDBLite consensus disorder prediction 316 330 - -
Seca5g05415 486 MobiDBLite consensus disorder prediction 367 381 - -
Seca5g05415 486 MobiDBLite consensus disorder prediction 316 344 - -
Seca5g05415 486 PANTHER F20B24.21 1 463 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca5g05415 Seca-Chr5 111050524 111055352 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca5g05415 1 306 C3H Transcription Factor Family AT3G10810 41.158 3.57e-55 190
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca5g05415 - - ccaj:109803451 711.835