Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca5g05382 ATGGAGATGAAGAAGGGCATGTGGAATGTACTTGATGGGTTGAAACCAGTGTTGTTGATGGTTGGAGTGCAGATTGCATATGCTGCAGTTAATGTGTTCTATAAGCTCGCCATCAACGATGGAATGAGTGTTAAAGTAGCCACTGCCTATCGTCTCGGTTTTGGATCTGCTTTCACTGTTCCTCTTGCTCTCATTTCTGAAAGGAACAACAGACCAAAACTGACTTGGAGGGTGCTCTTCATGGCATTTCTTTGCGGCTTGTTTGGGGGAAGTTTATTTCAAAACCTTTTCTACGAGGCACTGGCTTTAACATCAGCAACGTTTGTGTCCGCTATCTACAACCTCATTCCGGCCATCACCTTTATCTTGGCCATCTCCTGCGGATTGGAAAGATTAAATTTGAGGGCAGCAGCAGGAAAGGCCAAGGTGTTTGGAACTTTAATTGGAATCGGTGGGGCAATGTTGTTGACCTTTTTCAAAGGAGTAGAATTAGATATTTGGCCCTTCCACATCAACCTTTTGCATCCACATCACCAACACGTCGCACCACTCCATGCCCACTCTGCTAGCGCTCAATTGTTGGGTGTTCTCTGTTCCATAGGAAGCTGCTTCTCTTTTGCTCTCTGGTTTATAATTCAGGCTAAGATGATCAAAGAATATCCAAGCCATTACTCAAGCACTGCTTTGATGTCTACAATGGGAGCAATACAAGCCACTGCTTTTGGTCTTTGTGTTGAGAGAGATTTGAACCAATGGAAGCTGGGTTGGAATATCAGGCTACTAGCCGTGGCTTACTCGGTATATTATATATTTAATTTACTCAAATTAATCCTCACCTTGTAA 843 0.4353 MEMKKGMWNVLDGLKPVLLMVGVQIAYAAVNVFYKLAINDGMSVKVATAYRLGFGSAFTVPLALISERNNRPKLTWRVLFMAFLCGLFGGSLFQNLFYEALALTSATFVSAIYNLIPAITFILAISCGLERLNLRAAAGKAKVFGTLIGIGGAMLLTFFKGVELDIWPFHINLLHPHHQHVAPLHAHSASAQLLGVLCSIGSCFSFALWFIIQAKMIKEYPSHYSSTALMSTMGAIQATAFGLCVERDLNQWKLGWNIRLLAVAYSVYYIFNLLKLILTL. 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca5g05382 280 Pfam EamA-like transporter family 15 157 IPR000620 GO:0016020
Seca5g05382 280 SUPERFAMILY Multidrug resistance efflux transporter EmrE 50 158 - -
Seca5g05382 280 PANTHER WAT1-RELATED PROTEIN 15 268 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca5g05382 Seca-Chr5 110805470 110807607 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca5g05382 14 266 Nodulin-like Gene Family AT1G25270 41.107 6.88e-64 202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca5g05382 - - gmx:100809587 432.95