Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca5g05381 ATGGGAGATATATGGAAAGTAGTGCATGGGTTGAAGCCAGCCCTTCTGATGTTGGTGGTGCAGATTGCATTTGCTTCCGTGAATGTGCTCTACAAAATTGCCATTAACGATGGAATGAGTGTGAGAGTAGTTACTGCATACCGTCTCATTTTTGCAGCAGCTTGCACTATTCCACTTGCTCTTATTTTTGAAAGGTTACCTTTTCTAATTACTTTGGTGAAATTAACGCCTCTTCCTTTTTTATTTATTATTTACAGGAAGAACAGACCAAAGCTGACTTGGAGGGTCGTCTTTATGTCATTTTTCTGTGGACTATTTGGGGGAAGTTTATTCCAAAATCTTTATTTCGAGTCCTTGGCATTGATATCAGCCACATTTGCTTCCGCTGTTTATAATCTCATTCCTGCCGTCACTTTTATTTTGGCCGTCGCCTATAGGTTCGAAAAATTAAATTTCCAATCAGCAGGAGGCAAGGCTAAGGTGTTAGGAACCATAACAGGAATTAGTGGGGCAATGATGCTGACCTTTCTCAAAGGTGTAGAAATTAACATTTGGACCTTCCACATTAACCTTTTGCATAAAAATGCCAACTCGGGAACACTAAATAGTGACTCTGGCAGTAAATTGTTGGGAATTTTTTGTGGTCTTGGAAGCTGCTTCTGTTTTGCATTATGGCTCATCATTCAGGCTAAGATGAGCAAAGAGTATCCAAACCATCATTCAAGTACAGCTTTGATGTCCTTCATGGGGGCAATACAAGCCACGGTTTTTGCCCTTTGTGTTGAGAAGGATTGGAGCCAATGGAGATTGGGTTGGAGTATTAGGCTTCTAACAGCAGCGTATTCGGGAATTGTGGCCTCTGGAATAATGGTTGTTGTGATTGCATGGTGTGTAAGGATGAGAGGTCCACTGTATGCCTCTGTTTTCAATCCTCTGATGCTTGTGCTTGTGGCTATTGCTGGTTCTTTGATGTTGGATGAGAACCTATACTTAGGAAGTGTAATTGGAGCAGTGCTAATTGTGATTGGATTGTACATGGTGCTGTGGGGTAAGAGCAAAGAAATGAAAAAGGTGACTCACTTAGAAATCACTCCTGAAATCGAAGAAATTGAGGTTGTTGTCACGTCTACGACAGAAGATCAAGATAAAGGTAACAGCAGCCACACCATTGCTGTTGGCAAGGATGTTGATAATTCTTCAAAAGGTGAACACCAAGAACAAGACACCAAAAACAACGGAAAAGAAGAAATTGCTTCAAATGAATTAGCCTAA 1272 0.4088 MGDIWKVVHGLKPALLMLVVQIAFASVNVLYKIAINDGMSVRVVTAYRLIFAAACTIPLALIFERLPFLITLVKLTPLPFLFIIYRKNRPKLTWRVVFMSFFCGLFGGSLFQNLYFESLALISATFASAVYNLIPAVTFILAVAYRFEKLNFQSAGGKAKVLGTITGISGAMMLTFLKGVEINIWTFHINLLHKNANSGTLNSDSGSKLLGIFCGLGSCFCFALWLIIQAKMSKEYPNHHSSTALMSFMGAIQATVFALCVEKDWSQWRLGWSIRLLTAAYSGIVASGIMVVVIAWCVRMRGPLYASVFNPLMLVLVAIAGSLMLDENLYLGSVIGAVLIVIGLYMVLWGKSKEMKKVTHLEITPEIEEIEVVVTSTTEDQDKGNSSHTIAVGKDVDNSSKGEHQEQDTKNNGKEEIASNELA. 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca5g05381 423 PANTHER WAT1-RELATED PROTEIN 12 362 IPR030184 GO:0016020|GO:0022857
Seca5g05381 423 Pfam EamA-like transporter family 12 174 IPR000620 GO:0016020
Seca5g05381 423 Pfam EamA-like transporter family 210 348 IPR000620 GO:0016020
Seca5g05381 423 MobiDBLite consensus disorder prediction 397 415 - -
Seca5g05381 423 MobiDBLite consensus disorder prediction 377 394 - -
Seca5g05381 423 SUPERFAMILY Multidrug resistance efflux transporter EmrE 266 353 - -
Seca5g05381 423 SUPERFAMILY Multidrug resistance efflux transporter EmrE 81 170 - -
Seca5g05381 423 MobiDBLite consensus disorder prediction 376 423 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca5g05381 Seca-Chr5 110788720 110791204 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca5g05381 11 372 Nodulin-like Gene Family AT1G25270 39.344 9.48e-94 284
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca5g05381 - - gmx:100798755 487.263