Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca5g05380 ATGAAGGAGGAGAGATGCAATAATGTGGCAAAGCCAACGGTGCTGATGGTGGGTGTGCAGATAGCGTTTGCTGGGATGAATGTCCTCTACAAACTCGCCGTGAACGATGGGATGAACTTGAGGGTCATTATTGCATACCGCTTTCTATTCGCTACTGCTTTCATAGCTCCACTTGCTCTCATTCTTGAAAGGAACAAGACCACAAAGATGACTTGGACGAGGATCATTAGCTCAAAACTTCTACTTAGAGTCTCTGGCTTTTACTTCTGTAACGTTTGCATCCGCCATGTCCAACCTTATGCCAGCCATAACCTTTATCATGGCCGTTTCTTTCGGTTTGGAAAAAATAAATTTGATGAGAAGGGGAGGAGGGAAGGCAAAGGGTCCTTTCACTTAAACCTCTTGCATCATCAAAACGGTGCGCGTTCATCACATGCTAATAGTAAGCCTGTCTTGGGTGCTCTCTGTGCCTTGGCTGGTAGCGTCTCTTCCGCATTGTGGCTCATTATTCAGGCAAAAATGACAAAGAGATACCCGAATCATTACTCAGCCACCGCGTTGATGTCTTTTTGGTCGTCACTGCTATCCATTGTGTTTGCTCTTTGCTTTGAAAGGAATTTGAGTCAGTGGAGGTTAGGTTGGAATATTAGGCTTTTAACTGTATCTTATGCGGGTATAGTGGTTTCTGGAGTAGTGGTGGTTGTAATGTCATGGTGTGTGCACACGAGAGGTCCATTGTTTGTCTCTATTTTTAACCCTCTAGTGCTTGTGATATTGGCCATAGTTGATTCTACGATGTTGAACGAGAAGCTACATCTTGGAAGCATCATAGGAGCAGTGTTGATTGTATGTGGGTTATATGCGGTTCTATGGGGTAAAAGCAAAGAGGTGAAGGAGAAGAATCAATTGGTGCCATCATCACAAATCCCCCATGCATCCAAATCCAACACAGTCGAAATTGTCCTGAGGTCTGCAGTAGAAGTAGAAGATAAAAGCAACCGCAATGACAACAATAATGGTGTGCATGCAATTAGTAATTAG 1041 0.438 MKEERCNNVAKPTVLMVGVQIAFAGMNVLYKLAVNDGMNLRVIIAYRFLFATAFIAPLALILERNKTTKMTWTRIISSKLLLRVSGFYFCNVCIRHVQPYASHNLYHGRFFRFGKNKFDEKGRREGKGSFHLNLLHHQNGARSSHANSKPVLGALCALAGSVSSALWLIIQAKMTKRYPNHYSATALMSFWSSLLSIVFALCFERNLSQWRLGWNIRLLTVSYAGIVVSGVVVVVMSWCVHTRGPLFVSIFNPLVLVILAIVDSTMLNEKLHLGSIIGAVLIVCGLYAVLWGKSKEVKEKNQLVPSSQIPHASKSNTVEIVLRSAVEVEDKSNRNDNNNGVHAISN. 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca5g05380 346 PANTHER WAT1-RELATED PROTEIN 11 86 IPR030184 GO:0016020|GO:0022857
Seca5g05380 346 Pfam EamA-like transporter family 152 290 IPR000620 GO:0016020
Seca5g05380 346 SUPERFAMILY Multidrug resistance efflux transporter EmrE 192 295 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca5g05380 Seca-Chr5 110768951 110771998 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca5g05380 11 318 Nodulin-like Gene Family AT1G68170 36.919 5.01e-67 213
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca5g05380 - - gmx:100810649 354.369