Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca5g05378 ATGAAGGAGGAGAGATGCAATAACGTGGTGAAGCCAACGGTGCTGATGGTGGGTGTGCAGATAGCATTTGCTGGGATGAATGTCCTTTACAAGCTCACCGTGAACGATGGCATGAACTTGAGAGTCGTTATTGCATACCGCTTTCTATTCGCTACTGCTTTCATAGCTCCACTTGCTCTCATTCTTGAAAGGAACAAGACCGCAAAGATGACTTCGACGGGTATAGTGGTTTCTGGAGTAGTGGTGGTCGCAATGTCATGGTGTGTGCACATGAGAGGTCCATTGTTCGTCTCTATTTTTAGCCCTCTAGTGCTTGTGATATTGGCCATGGTTGATTCTACGATGTTGAACGAGAAGCTACACCTTGGAAGCATCATAGGAGCAGTGTTAATTGTATGTGGGTTATATGCGGTTCTATGGGGTAAAAGCAAAGACGTGAAGGAGACGAACCAATTGGTGTCATCACAAATCCACAATGGATCCAAATCCAACACAGTCGAAATAGCCGTGAGTTCTGCAAGATAA 525 0.4533 MKEERCNNVVKPTVLMVGVQIAFAGMNVLYKLTVNDGMNLRVVIAYRFLFATAFIAPLALILERNKTAKMTSTGIVVSGVVVVAMSWCVHMRGPLFVSIFSPLVLVILAMVDSTMLNEKLHLGSIIGAVLIVCGLYAVLWGKSKDVKETNQLVSSQIHNGSKSNTVEIAVSSAR. 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca5g05378 174 Pfam EamA-like transporter family 13 139 IPR000620 GO:0016020
Seca5g05378 174 SUPERFAMILY Multidrug resistance efflux transporter EmrE 46 144 - -
Seca5g05378 174 PANTHER WAT1-RELATED PROTEIN 72 146 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca5g05378 Seca-Chr5 110748801 110750040 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca5g05378 75 172 Nodulin-like Gene Family AT1G68170 48.980 3.75e-25 97.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca5g05378 - - pda:120111952 143.665