Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca5g05376 ATGAAGGATAGGTGCGATGTGGTGCAGGCGTTGAAGCCAGCGCTGTTAATGGTGATGGTGCAGATTGCATTTGCTGGCGTCAATGTCCTCTACAAGCTTGCTGTCAACGATGGCATGAGCCTCAGGATCGTCGTTGCCTATCGCTTTCTATTCGCAACCGCTTTCATAGCTCCAATTGCTCTCATTCTTGAAAGGAAAAGGACAAAGATGACTTGGATGGTACTGTTTCAGTCATTTCTCTGCGGTTTATTTGGGTATGTATGTATGTTTATTCATTATGGTTTGATTGATTCTCTTCTAGGATCATTAGCTCAAAACTTCTACTTAGAGGCCCTGGCTTTAACTTCTGCGACATTTGCATCAGCCATGGCCAACCTTATACCAGCCATAACCTTTATCATGGCCGTTTCCTTCGGTTTGGAAAAATTAAATTTGAGATCGGTAGCAGGGAAGGCGAAGATAGTGGGTACATTAACTGGAATTGGTGGGGCAATGATACTGACCTTCCTTAAAGGTAAGGAAATCAATATAAGGTCCCACTTAAACCTTTTGCATCATTCAAACGGTTCGCACATACATGTTATCGCTGGTGGTAAGACCGTTTTGGGTGCTCTGTGCGCCTTGGCCAGTGGCATCTCTTACGCATGTTGGCTCATTATTCAGGCAAAGATGAGTGAAAGATACCCGAGTCATTATTCAAGCACCGCGTTGATGTCTTTTTGGGGGTCAGTGCTATCCATTGTGTTTGCTCTTTGCATTGAGAGGGATTGGAGTCAGTGGAGATTGGGTTGGAATATTAGGCTTCTAACCGTTGCTTATTCGGGTATAGTGGTTTCGGGAATGATGGTGACTGTAATTTCATGGTGTGTACACATGAGAGGGCCACTGTTTGTCTCTGTTTTTAGCCCTCTAATGCTTGTGATGGTGGCCTTGGCTGGCTGTACCATGTTGAACGAGAAGTTGCAATATGGAAGCATCATCGGAGCAGTGTTGATTGTGTGTGGCTTATACGTGGTTTTGTGGGGTAAAAGCAAAGAGGTGAAGAAAATGAATAAATTAGTGCCATCACAAAGCCCTCAAGAATCACATACAGTCGAAATAGTCGTGAGGTCCGCAGAAGACGAGAAAAGCAACCACAATAACAATAACACTCACCATACTAATGATGTACAAGTGGTTAGGGATGATGAAGCAGATGGACATGAAGAGAATAGTGAAAATGTACAAAATCAGGGAAAAGGAGAAGAAACATCTCATAATGCCTGA 1266 0.436 MKDRCDVVQALKPALLMVMVQIAFAGVNVLYKLAVNDGMSLRIVVAYRFLFATAFIAPIALILERKRTKMTWMVLFQSFLCGLFGYVCMFIHYGLIDSLLGSLAQNFYLEALALTSATFASAMANLIPAITFIMAVSFGLEKLNLRSVAGKAKIVGTLTGIGGAMILTFLKGKEINIRSHLNLLHHSNGSHIHVIAGGKTVLGALCALASGISYACWLIIQAKMSERYPSHYSSTALMSFWGSVLSIVFALCIERDWSQWRLGWNIRLLTVAYSGIVVSGMMVTVISWCVHMRGPLFVSVFSPLMLVMVALAGCTMLNEKLQYGSIIGAVLIVCGLYVVLWGKSKEVKKMNKLVPSQSPQESHTVEIVVRSAEDEKSNHNNNNTHHTNDVQVVRDDEADGHEENSENVQNQGKGEETSHNA. 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca5g05376 421 Pfam EamA-like transporter family 202 340 IPR000620 GO:0016020
Seca5g05376 421 PANTHER WAT1-RELATED PROTEIN 12 355 IPR030184 GO:0016020|GO:0022857
Seca5g05376 421 MobiDBLite consensus disorder prediction 373 421 - -
Seca5g05376 421 SUPERFAMILY Multidrug resistance efflux transporter EmrE 247 345 - -
Seca5g05376 421 MobiDBLite consensus disorder prediction 389 409 - -
Seca5g05376 421 SUPERFAMILY Multidrug resistance efflux transporter EmrE 98 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca5g05376 Seca-Chr5 110681201 110686701 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca5g05376 1 350 Nodulin-like Gene Family AT1G68170 43.590 7.45e-92 280
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca5g05376 - - gmx:100810649 546.969