Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca5g05370 ATGGCCCGTAGCGAATCCAATCTTTCCAAAGTCTACAGCATAGACGTGGAAGGAGAAGCTGGAGATCATCAAGAGGTTGATGGTGGTGATTTTGACTACACACAGAGGGCTCAGTGGCTTAGAGCTGCTGTTTTGGGTGCCAATGATGGGCTGCTCTCCACTGCATCTCTCATGATGGGAGTTGGTGCTGTGAGGAAGGATGTTAAGACAATGATGCTTACTGGTGTTGCTGGTTTGGTAGGTGGAGCTTGCAGCATGGCTATTGGAGAGTTTGTTTCTGTTTATGCACAATATGATATTGAACTCTCTCAGATGAAGAGAGAAGGAAACGTTCAGAAGAACAAATTGATGAAGAGAGAAGGAAACGTTCAGATAAACAAACTGCCTAACCCCTATTACGCTTCCTTTGCCTCCGCCGTTGCTTTTGCCGTTGGTGCGTTGGTGCCCCTACTTGGTGCCGCCTTTATCAATGATTATGAGGTGAGGTTGGGGGTGATGGTCGCTATTGTGAGCCTCGCCTTGGTGGTGTTTGGATGGTTGGGTGCCTTTCTAGGGAAAGCGCCTTTGGTAAAGTCATCTTTGAGGGTCTTGATTGGGGGATGGTTCGCCATGGCGTTTACTTTTGGTTTAACCAAGCTTGTAGATCATGTTGGACTTTAA 660 0.4727 MARSESNLSKVYSIDVEGEAGDHQEVDGGDFDYTQRAQWLRAAVLGANDGLLSTASLMMGVGAVRKDVKTMMLTGVAGLVGGACSMAIGEFVSVYAQYDIELSQMKREGNVQKNKLMKREGNVQINKLPNPYYASFASAVAFAVGALVPLLGAAFINDYEVRLGVMVAIVSLALVVFGWLGAFLGKAPLVKSSLRVLIGGWFAMAFTFGLTKLVDHVGL. 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca5g05370 219 Pfam VIT family 40 113 IPR008217 GO:0005384|GO:0030026
Seca5g05370 219 Pfam VIT family 116 211 IPR008217 GO:0005384|GO:0030026
Seca5g05370 219 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 25 216 IPR008217 GO:0005384|GO:0030026
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca5g05370 Seca-Chr5 110633020 110639715 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca5g05370 22 219 Nodulin-like Gene Family AT3G43660 65.152 1.36e-89 260
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca5g05370 K22736 - gmx:121175311 278.1