Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca5g05365 ATGTCTTCCCTTGCTCATAAAACTAATTATGAAACTTCACCTAACCATGTTGAGATTCCTATCCATGCCAATGGTGTGGAGCCAAAACCAAGGCAAGAGGATGAAGAGGGCAACATTGACTACTCACAGAGGGCACAGTGGCTCCGAGCAGCTGTGTTGGGAGCCAATGATGGATTGGTCTCTGTTGCATCATTGATGATGGGTGTTGGAGCTGTTAAGGAAAACATCAATGCCATGCTTGTTGCTGGGTTGGCAGGGTTAATTGCTGGTGCTTGTAGCATGGCAATTGGAGAGTTTGTCTCTGTGTACACTCAGTATGATATAGAGATAGCTCAAATTGAAAGAGTGAATAATGTTGCTGCTGGAATAATGAGTGAAGAAGCTCAAAGGGTGAAGCAGAAGCTGCCAAATCCACTCCAGGCTGCTCTGGCATCAGCACTTGCATTTTCTGTGGGTGCCCTGTTGCCACTGCTAGCAGCTGCATTTATAAGGGACTATAAGATTAGGCTGGTTGTTGTTGCATCTGTTGCTAGCCTGGCATTGCTGGTATTTGGTGGGGTTGGAGCAGTGCTTGGAAAAACTCCACTGGGGAAGCCATGTCTCAGAGTCCTCATTGGTGGCTGGATCGCTATGGCCATAACATTTGGCCTCACCAAGTCATTTGGCTCTGTTGGACTTTGA 681 0.4699 MSSLAHKTNYETSPNHVEIPIHANGVEPKPRQEDEEGNIDYSQRAQWLRAAVLGANDGLVSVASLMMGVGAVKENINAMLVAGLAGLIAGACSMAIGEFVSVYTQYDIEIAQIERVNNVAAGIMSEEAQRVKQKLPNPLQAALASALAFSVGALLPLLAAAFIRDYKIRLVVVASVASLALLVFGGVGAVLGKTPLGKPCLRVLIGGWIAMAITFGLTKSFGSVGL. 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca5g05365 226 Pfam VIT family 124 218 IPR008217 GO:0005384|GO:0030026
Seca5g05365 226 Pfam VIT family 48 118 IPR008217 GO:0005384|GO:0030026
Seca5g05365 226 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 31 221 IPR008217 GO:0005384|GO:0030026
Seca5g05365 226 MobiDBLite consensus disorder prediction 16 38 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca5g05365 Seca-Chr5 110571645 110572325 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca5g05365 32 226 Nodulin-like Gene Family AT3G43660 62.051 7.74e-86 251
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca5g05365 K22736 - gmx:100817158 278.485