Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca5g05342 ATGGAGTACAAAATTAGCTTCCTTTTAGTAGTGTTTGTTTTGCTTGCTGTTGCTGTGCATGGCAACGGGGAAGGGACGTGTGTAGGATTCTATTCTCGTACATGCCCTCACGTTGAGTCAATTGTGAGGTCTACAGTAGAATCCCACGTAAGGTCTAACCCTAGTCTTGCAGCCGGGTTGCTTAGGATGCACTTCCATGATTGCTTTGTGAGAGGTTGTGACGCTTCAGTTCTCATTGCCGGTAGTGGCACTGAGAGAGAAGCAGGGCCAAACCGTAATTTAAAAGGATTTGAGGTTATTGATGATGCAAAGGCAAAACTCGAGGCTGAATGCCCTGGTGTTGTCTCTTGTGCTGATATCCTTACCCTTGCTGCACGTGATTCCGTTGTTCTGAGTGGTGGACGAAGTTGGGCAGTGCCTACAGGGCGCAGAGATGGAACGGTATCAATTGGGAGTGAAAGTCTAGTGTTGCCAGGTCCTAATGATTCCGTTGCAATTCAGAAACAGAAGTTTGCTGATCAGGGTCTTAATGCTCAAGACCTCGTCATTCTTGCCGGTGGGCATACAATTGGCACAACTGCTTGCCAATTCTTCGCGGACAGAATATACAACTCAGCAAATGGCACAGATCCTTCGATCGACCCAGCATTTCTTCCAACTCTGCGACAAATTTGCCCACAAAACCAACCAACGAAGCGAGTTGCACTTGACACTGGAAGCCAATTCAAATTCGACACTTCTTACTTTGCTAACCTCAAGAAAGGCCACGGAGTTCTCCGTTCTGATCAGGTGCTTTGGACGGATCCTTCCACAAGGACCATTGTTCAGAGATTCTTAGCCACCGGTCCCTTCAACGTCGAATTTGGCAGGTCTATGGTTAAGATGGCCAATATTGGTATCAAGACTGGTTCTAATGGCGTTGTGTTTCTTTTGCTTATTGCTTTGGGTACTGTCCATGGGACGCGTGTAGGGTTCTATTCAAGTACATGTCCTCGCGCTGAATCCATTGTTAGGTCCACAGTGCAATCTCACGTTAACTCTGATCCTACTCTGGCCGCGGGGTTACTTAGGATGCACTTCCATGACTGCTTTGTGCAAGGCTGTGACGCTTCTGTTCTCATTGCTGGCGATGGCACTGAGAGAACAGCACCTGCAAACCTTGGTTTAAGAGGATTTCAGGTCATCGATGATGCAAAGACACAGATCGAAGCTGCATGCCCTGGTGTTGTCTCTTGTGCTGATATCCTTGCCCTCGCTGCCCGTGATTCCGTTGTTCTGAGTGGTGGACTGAGCTGGCAAGTGCCAACTGGACGCAAAGATGGGCGCGTGTCACGTGCTTCGGATGCGAATAACTTGCCTGCCCCTAATGACTCTGTTGATGTCCAGAAACAGAAGTTCTCAGCTAAGGGCCTCAATACTCAAGACCTCGTCACCCTTGTTGGTGGACATACCATTGGTACTACAGCTTGCCAATTCTTCAGTAACAGATTGTACAACTTCAATGCCAATGGTTCTGATCCTTCCATTGACCCTTCATTTCTTCCCCAACTAAGAGCAGTCTGCCCTCAGAACAGTGGCGGTTCAAACCGAGTTGCGCTGGATAACGGTAGTCAAAACAAATTTGATACATCTTACTTTTCTAATTTGAGGAACGGTCGTGGAATTCTGGAGTCTGATCAGGCGCTTTGGAGCGATGCTTCCACAAAGACCTTTGTACAGAGGTACTTGGGGTTGAGAGGCTTGCTTGGATTAACATTCAATGTCGAATTTGGAAAGTCTATGGTGAAGATGAGCAACATTGGGGTCAAGACCGGTGCTGATAGTGAACCTATTATTACGAAAATGTCGGGTTGTGGTTATTTCAATATGAAAAGGTTGTTGATGGTGTTTGTTTTGGTTGCTGTGGCCGTTGATAACAAATTAGTGCATGGTCAAGGCTCGCGTGTAGGTTTCTATTCGTCTACATGTCCTCGCGCTGAGTCCATTGTTAAATCCACAGTTGAATCCCACGTTAAATCTGACCCTACATTTGCTGCTGGGTTACTTAGGATGCACTTCCACGATTGCTTCGTGAGAGGCTGTGATGCTTCTGTTCTCATTGCTGGCGCTGGCACTGAGAGAACAGCATCTGCAAATCTTGGTTTAAAAGGATTTGAGGTCATTGATGATGCCAAGGCAAAGCTCGAGGCTGCCTGCCCTGGTGTTGTCTCATGTGCTGACATCCTTGCCCTTGCTTCACGTGATGCCGTTGTTCTGAGTGGTGGAATGAGTTGGCAAGTGCCTACTGGACGCAGAGATGGGCGCGTGTCACAGGCTTCAGAGGTCAACGATTTGCCTGGCCCTTCTGACTCTGTTGCTGTACAGAAACAAAAATTTGCAGCAATGGGTCTCAACACTCAAGACCTCGTCACCCTTGTTGGTGGGCATTCCATTGGTACTACAGCTTGCCAATTCTTCAGGAACAGATTGTACAACTTCACTGCAAATGGTGCTGATCCTTCCATCGACGCTTCATTTCTTCCTCAACTACAATCACTCTGCCCCCAAAATAGTTGCGCTTCAAACCGAGTAGCGCTAGATAACGGCAGTGAAAACAGATTTGATACGTCTTTCTTTGCTAATTTGAGGAATGGGCGCGGAATTCTGCAGTCTGATCAAGCGCTGTGGAGTGATGCTTCCACGAAGGCTTTTGTACAGAGGTACCTGACCGTGAAAGGCTTACCTGGCTTGAAATTCAACGTCGAATTTGGAAAATCTATGGTGAAGATGAGCAACATTGGATTGAAGACCGGCACTGATGGTGAAATTCGCAAGATATGCTCTGCTATTAACTAA 2835 0.4727 MEYKISFLLVVFVLLAVAVHGNGEGTCVGFYSRTCPHVESIVRSTVESHVRSNPSLAAGLLRMHFHDCFVRGCDASVLIAGSGTEREAGPNRNLKGFEVIDDAKAKLEAECPGVVSCADILTLAARDSVVLSGGRSWAVPTGRRDGTVSIGSESLVLPGPNDSVAIQKQKFADQGLNAQDLVILAGGHTIGTTACQFFADRIYNSANGTDPSIDPAFLPTLRQICPQNQPTKRVALDTGSQFKFDTSYFANLKKGHGVLRSDQVLWTDPSTRTIVQRFLATGPFNVEFGRSMVKMANIGIKTGSNGVVFLLLIALGTVHGTRVGFYSSTCPRAESIVRSTVQSHVNSDPTLAAGLLRMHFHDCFVQGCDASVLIAGDGTERTAPANLGLRGFQVIDDAKTQIEAACPGVVSCADILALAARDSVVLSGGLSWQVPTGRKDGRVSRASDANNLPAPNDSVDVQKQKFSAKGLNTQDLVTLVGGHTIGTTACQFFSNRLYNFNANGSDPSIDPSFLPQLRAVCPQNSGGSNRVALDNGSQNKFDTSYFSNLRNGRGILESDQALWSDASTKTFVQRYLGLRGLLGLTFNVEFGKSMVKMSNIGVKTGADSEPIITKMSGCGYFNMKRLLMVFVLVAVAVDNKLVHGQGSRVGFYSSTCPRAESIVKSTVESHVKSDPTFAAGLLRMHFHDCFVRGCDASVLIAGAGTERTASANLGLKGFEVIDDAKAKLEAACPGVVSCADILALASRDAVVLSGGMSWQVPTGRRDGRVSQASEVNDLPGPSDSVAVQKQKFAAMGLNTQDLVTLVGGHSIGTTACQFFRNRLYNFTANGADPSIDASFLPQLQSLCPQNSCASNRVALDNGSENRFDTSFFANLRNGRGILQSDQALWSDASTKAFVQRYLTVKGLPGLKFNVEFGKSMVKMSNIGLKTGTDGEIRKICSAIN. 945
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca5g05342 944 PANTHER PEROXIDASE 25-RELATED 311 605 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca5g05342 944 FunFam Peroxidase 453 597 - -
Seca5g05342 944 FunFam Peroxidase 158 295 - -
Seca5g05342 944 ProSitePatterns Peroxidases proximal heme-ligand signature. 801 811 IPR019793 -
Seca5g05342 944 ProSitePatterns Peroxidases active site signature. 57 68 IPR019794 GO:0004601
Seca5g05342 944 MobiDBLite consensus disorder prediction 437 458 - -
Seca5g05342 944 PRINTS Haem peroxidase superfamily signature 57 71 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca5g05342 944 PRINTS Haem peroxidase superfamily signature 133 145 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca5g05342 944 PRINTS Haem peroxidase superfamily signature 180 195 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca5g05342 944 PRINTS Haem peroxidase superfamily signature 115 132 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca5g05342 944 PRINTS Haem peroxidase superfamily signature 534 549 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca5g05342 944 Gene3D Peroxidase, domain 2 779 923 - -
Seca5g05342 944 PRINTS Plant peroxidase signature 409 419 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca5g05342 944 PRINTS Plant peroxidase signature 330 349 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca5g05342 944 PRINTS Plant peroxidase signature 548 565 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca5g05342 944 PRINTS Plant peroxidase signature 532 547 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca5g05342 944 PRINTS Plant peroxidase signature 592 605 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca5g05342 944 PRINTS Plant peroxidase signature 390 403 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca5g05342 944 PRINTS Plant peroxidase signature 428 443 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca5g05342 944 PRINTS Plant peroxidase signature 474 486 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca5g05342 944 PRINTS Plant peroxidase signature 354 374 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca5g05342 944 ProSitePatterns Peroxidases proximal heme-ligand signature. 475 485 IPR019793 -
Seca5g05342 944 SUPERFAMILY Heme-dependent peroxidases 322 611 IPR010255 GO:0004601|GO:0006979|GO:0020037
Seca5g05342 944 Gene3D - 650 944 - -
Seca5g05342 944 FunFam Peroxidase 779 923 - -
Seca5g05342 944 ProSitePatterns Peroxidases active site signature. 678 689 IPR019794 GO:0004601
Seca5g05342 944 FunFam Peroxidase 650 790 - -
Seca5g05342 944 CDD secretory_peroxidase 322 609 IPR033905 GO:0004601|GO:0042744
Seca5g05342 944 ProSiteProfiles Plant heme peroxidase family profile. 320 622 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca5g05342 944 FunFam Peroxidase 29 163 - -
Seca5g05342 944 CDD secretory_peroxidase 28 308 IPR033905 GO:0004601|GO:0042744
Seca5g05342 944 ProSiteProfiles Plant heme peroxidase family profile. 646 944 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca5g05342 944 CDD secretory_peroxidase 648 943 IPR033905 GO:0004601|GO:0042744
Seca5g05342 944 Gene3D - 29 308 - -
Seca5g05342 944 ProSitePatterns Peroxidases active site signature. 352 363 IPR019794 GO:0004601
Seca5g05342 944 FunFam Peroxidase 324 464 - -
Seca5g05342 944 SUPERFAMILY Heme-dependent peroxidases 28 309 IPR010255 GO:0004601|GO:0006979|GO:0020037
Seca5g05342 944 Gene3D Peroxidase, domain 2 158 295 - -
Seca5g05342 944 Gene3D Peroxidase, domain 2 453 597 - -
Seca5g05342 944 Gene3D - 324 609 - -
Seca5g05342 944 Pfam Peroxidase 337 575 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca5g05342 944 Pfam Peroxidase 663 902 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca5g05342 944 Pfam Peroxidase 42 279 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca5g05342 944 SUPERFAMILY Heme-dependent peroxidases 648 944 IPR010255 GO:0004601|GO:0006979|GO:0020037
Seca5g05342 944 ProSiteProfiles Plant heme peroxidase family profile. 25 308 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca5g05342 Seca-Chr5 110326498 110341400 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca5g05342 623 944 Peroxidase AT2G41480 61.111 7.63e-138 413
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca5g05342 K00430 - gmx:100820620 504.212