Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca5g05338 ATGGCGGAGGAGAGAGAGGAGATCAATGGCGGACGCGGATTCTCGATGGACTCGACGGAATCAAGGTGGGTTATCCAGGAGGAGGATGAAGATGCATCGGATATAGAAGATTACGATGCCGATTTGAGACTGAGAGGGCACGCTAGTGTACTGGATTCGGAAGAGGATGAGGAAAACGCGGAGCAGAAACTCGTTCGTACTGGACCTCGAATCGATTCCTTCGATGTCGAGGCTCTTGAGGTCCCCGGTGCTTTTAGAAATGACTATGAGGATATCAGTGTGGGAAAGAAAATTGTATTGGCTTTTCAGACTCTTGGTATTGTCTTTGGTGATGTTGGAACGAGTCCATTATATACATTCAGTGTTATGTTTAGAAAGGCCCCTATTAATGGAAATGAAGACATTCTTGGAGCATTATCACTTGTCTTGTACACTTTAATCTTGATTCCTTTATTGAAGTATGTCCTGGTTGTTCTGTGGGCCAATGATGATGGTGAAGGTGGTACTTTTGCCTTGTATTCCTTGATTTGTCGTCATGCTAAGGTGAGTCTTCTCCCCAATCAGTTACCATCAGATGCCCGTATATCAAGCTTTAGGCTAAAGGTGCCATCCCCTGAGCTTGAAAGGTCGTTAAAAATCAAGGAAAGACTTGAGTCTTCTCTGACTCTGAAGAAGACTATACTAATATTAGTGCTTGCTGGTACTTCTATGGTGATTGCTAACGGTGTTGTTACACCAGCAATGTCAGTATTGTCATCTGTGGGTGGTTTAAAAGTTGGGGTAGATGCAATCAAGCAAGATGAAGTGGTGATGATTTCAGTTGCCTGCCTAATCATTTTGTTCAGTGTACAGAAGTATGGAACAAGTAAAGTAGGACTTGCCGTAGGACCTGCTTTGTTCATATGGTTTTGTTCTCTTGCGGGCATCGGGATATACAATCTTGTCAAATATGACAGCAGTGTCTTGAGGGCATTTAATCCTATTCACATCTACTACTTCTTCAAGAGGAACTCAACAAAAGCATGGTATTCTCTTGGGGGCTGTCTTCTGTGTGCAACTGGTTCTGAGGCCATGTTTGCAGATCTTTGCTACTTTTCTGTACGATCAGTTCAGCTTACATTTGTCTTTCTTGTTTTGCCGTGCCTACTATTGGGTTATTTGGGTCAAGCTGCATACCTTATGGAAAACCGTGCTGATGCTGGTCAAGCCTTTTTTTCTTCTGTTCCAAGTGGTGCATTCTGGCCAACTTTCCTTATTGCTAACATTGCTGCACTGATTGCAAGTCGGGCTATGACAACAGCAACATTTTCATGTATAAAGCAATCAACTGCACTTGGTTGTTTCCCTCGTCTTAAAATCATTCATACCTCTCGGAAATTTATGGGCCAGATCTATATCCCTGTCCTAAACTGGTTTCTCTTGGCTGTTTCTCTGGTGCTTGTCTGCTCTATATCCAGCATTGATGAGATTGGAAATGCCTACGGCATTGCTGAGTTGGGGGTGATGATGATGACCACTATTTTAGTAACCCTTGTTATGCTTCTCATATGGCAGCTACACATCATCATAGTGCTGAGTTTCTTGGTAGTATTTTTGGGATTGGAGTTGACTTTCTTTTCATCTGTTCTGTGGAGTGTGACGGATGGAAGTTGGATAATATTGGTCTTTGCAGTAATAATGTTTTTTATAATGTATGTATGGAATTATGGAAGCAATCTCAAGTATGAAACTGAAGTCAAACAGAAACTGTCAATGGATTTGATGCGAGAATTAGGTTGTAATCTGGGGACAATACGAGCTCCTGGGATTGGTTTGCTGTATAATGAGTTGGTCAAAGGAATACCAGCAATTTTTGGACATTTTCTGACTACACTTCCAGCAATACACTCCATGATCATATTTGTGAGTATTAAGTATGTTCCAGTTCCTGTGGTGCCTCAAAGTGAAAGGTTCCTTTTCCGGCGAGTCTGCCCAAAAAGTTACCACATATTTCGTTGCATTGCCAGGTATGGTTACAAAGATGTACGAAAAGAAAATCACCAGACTTTTGAGCAGCTGCTGATTGAGAGCCTAGAGAAGTTTATACGTCGTGAGGCTCAAGAGAGGTCACTGGAGAGTGATGGGGATGAAGATACTGATTCAGAGGATGCGTACTCTGGTTCTAGGGTACTCATAGCTCCCAATGGGAGTGTTTACTCACTTGGTGTTCCCCTTCTGGCTGATTTTAAGGATACAATCAACCCTGTTTTAGAAGCAAGCATGTCAGAGGTGGAAAGCCCGGGGTCCCCTAATACCCCAGTGTTTGATGCTGAGCAGAGCCTTGAGAGGGAGTTATCTTTTATTCACAAAGCTAAAGAATCTGGAGTTGTTTATCTTCTTGGTCATGGGGATATAAGGGCAAGGAAGGACTCATGGTTTATCAAGAAGCTACTTATAAACTATTTTTATGCCTTTTTGAGGAAGAACTGCAGAAGGGGGATAACGACTTTAAGTGTACCTCACTCACATCTGATGCAAGTTAGCATGACTTACATGGTTTGA 2541 0.4242 MAEEREEINGGRGFSMDSTESRWVIQEEDEDASDIEDYDADLRLRGHASVLDSEEDEENAEQKLVRTGPRIDSFDVEALEVPGAFRNDYEDISVGKKIVLAFQTLGIVFGDVGTSPLYTFSVMFRKAPINGNEDILGALSLVLYTLILIPLLKYVLVVLWANDDGEGGTFALYSLICRHAKVSLLPNQLPSDARISSFRLKVPSPELERSLKIKERLESSLTLKKTILILVLAGTSMVIANGVVTPAMSVLSSVGGLKVGVDAIKQDEVVMISVACLIILFSVQKYGTSKVGLAVGPALFIWFCSLAGIGIYNLVKYDSSVLRAFNPIHIYYFFKRNSTKAWYSLGGCLLCATGSEAMFADLCYFSVRSVQLTFVFLVLPCLLLGYLGQAAYLMENRADAGQAFFSSVPSGAFWPTFLIANIAALIASRAMTTATFSCIKQSTALGCFPRLKIIHTSRKFMGQIYIPVLNWFLLAVSLVLVCSISSIDEIGNAYGIAELGVMMMTTILVTLVMLLIWQLHIIIVLSFLVVFLGLELTFFSSVLWSVTDGSWIILVFAVIMFFIMYVWNYGSNLKYETEVKQKLSMDLMRELGCNLGTIRAPGIGLLYNELVKGIPAIFGHFLTTLPAIHSMIIFVSIKYVPVPVVPQSERFLFRRVCPKSYHIFRCIARYGYKDVRKENHQTFEQLLIESLEKFIRREAQERSLESDGDEDTDSEDAYSGSRVLIAPNGSVYSLGVPLLADFKDTINPVLEASMSEVESPGSPNTPVFDAEQSLERELSFIHKAKESGVVYLLGHGDIRARKDSWFIKKLLINYFYAFLRKNCRRGITTLSVPHSHLMQVSMTYMV. 847
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca5g05338 846 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 96 844 IPR003855 GO:0015079|GO:0016020|GO:0071805
Seca5g05338 846 Pfam K+ potassium transporter 101 674 IPR003855 GO:0015079|GO:0016020|GO:0071805
Seca5g05338 846 NCBIfam potassium uptake protein 100 845 IPR003855 GO:0015079|GO:0016020|GO:0071805
Seca5g05338 846 MobiDBLite consensus disorder prediction 1 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca5g05338 Seca-Chr5 110296386 110303182 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca5g05338 2 846 Inorganic Solute Cotransporters AT5G09400 78.947 0.0 1337
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca5g05338 - - gmx:100788008 1476.46